Protein–RNA interactions for Protein: Q8NEM0

MCPH1, Microcephalin, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1Q8NEM0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.74■■□□□ 1.71
MCPH1Q8NEM0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 AC092028.1-203ENST00000608262 953 ntBASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.73■■□□□ 1.71
MCPH1Q8NEM0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.72■■□□□ 1.71
MCPH1Q8NEM0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MCPH1Q8NEM0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.71■■□□□ 1.71
MCPH1Q8NEM0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MCPH1Q8NEM0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MCPH1Q8NEM0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
MCPH1Q8NEM0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MCPH1Q8NEM0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MCPH1Q8NEM0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MCPH1Q8NEM0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
MCPH1Q8NEM0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.69■■□□□ 1.7
MCPH1Q8NEM0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MCPH1Q8NEM0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.69■■□□□ 1.7
MCPH1Q8NEM0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MCPH1Q8NEM0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.68■■□□□ 1.7
MCPH1Q8NEM0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 AC138932.3-201ENST00000567634 1902 ntBASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
MCPH1Q8NEM0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
MCPH1Q8NEM0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.65■■□□□ 1.7
MCPH1Q8NEM0 TSPY9P-201ENST00000440215 945 ntBASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 TSPY11P-201ENST00000442607 1045 ntBASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 UNC93B8-201ENST00000511903 705 ntBASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.64■■□□□ 1.7
MCPH1Q8NEM0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
MCPH1Q8NEM0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
MCPH1Q8NEM0 HLA-L-211ENST00000482052 1765 ntBASIC25.64■■□□□ 1.69
MCPH1Q8NEM0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 SNX5-217ENST00000606557 1087 ntBASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MCPH1Q8NEM0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
MCPH1Q8NEM0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
MCPH1Q8NEM0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
MCPH1Q8NEM0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
MCPH1Q8NEM0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 AL356441.2-201ENST00000443009 864 ntBASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.61■■□□□ 1.69
MCPH1Q8NEM0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MCPH1Q8NEM0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms