Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.56■■□□□ 1.52
TTC9BQ8N6N2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TTC9BQ8N6N2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.55■■□□□ 1.52
TTC9BQ8N6N2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.55■■□□□ 1.52
TTC9BQ8N6N2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC9BQ8N6N2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.53■■□□□ 1.52
TTC9BQ8N6N2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.53■■□□□ 1.52
TTC9BQ8N6N2 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.53■■□□□ 1.52
TTC9BQ8N6N2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.53■■□□□ 1.52
TTC9BQ8N6N2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TTC9BQ8N6N2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.53■■□□□ 1.52
TTC9BQ8N6N2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC9BQ8N6N2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC9BQ8N6N2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.52■■□□□ 1.52
TTC9BQ8N6N2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.52■■□□□ 1.52
TTC9BQ8N6N2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.52■■□□□ 1.52
TTC9BQ8N6N2 MIR4466-201ENST00000606121 54 ntBASIC24.52■■□□□ 1.52
TTC9BQ8N6N2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TTC9BQ8N6N2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TTC9BQ8N6N2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TTC9BQ8N6N2 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.51■■□□□ 1.51
TTC9BQ8N6N2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.51■■□□□ 1.51
TTC9BQ8N6N2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
TTC9BQ8N6N2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 AL136116.3-201ENST00000402907 1138 ntBASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 AL356740.2-201ENST00000601559 647 ntBASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 AL512631.2-201ENST00000604634 923 ntBASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC9BQ8N6N2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 MIR6089-201ENST00000616698 64 ntBASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.49■■□□□ 1.51
TTC9BQ8N6N2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 AC019069.1-201ENST00000610008 1333 ntBASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 MIR6722-201ENST00000617286 78 ntBASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
TTC9BQ8N6N2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC9BQ8N6N2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC9BQ8N6N2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TTC9BQ8N6N2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.46■■□□□ 1.51
TTC9BQ8N6N2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC9BQ8N6N2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC9BQ8N6N2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.46■■□□□ 1.51
TTC9BQ8N6N2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC9BQ8N6N2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
TTC9BQ8N6N2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TTC9BQ8N6N2 AC004448.1-201ENST00000458332 883 ntBASIC24.45■■□□□ 1.5
TTC9BQ8N6N2 AC131274.2-201ENST00000580697 1507 ntBASIC24.45■■□□□ 1.5
TTC9BQ8N6N2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC9BQ8N6N2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.44■■□□□ 1.5
TTC9BQ8N6N2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.44■■□□□ 1.5
TTC9BQ8N6N2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TTC9BQ8N6N2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC9BQ8N6N2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.44■■□□□ 1.5
TTC9BQ8N6N2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms