Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIX5Q8N196 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.86■■□□□ 1.41
SIX5Q8N196 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.86■■□□□ 1.41
SIX5Q8N196 RASA4CP-201ENST00000424092 1398 ntBASIC23.86■■□□□ 1.41
SIX5Q8N196 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SIX5Q8N196 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SIX5Q8N196 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
SIX5Q8N196 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIX5Q8N196 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIX5Q8N196 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIX5Q8N196 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.85■■□□□ 1.41
SIX5Q8N196 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.85■■□□□ 1.41
SIX5Q8N196 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.85■■□□□ 1.41
SIX5Q8N196 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIX5Q8N196 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIX5Q8N196 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SIX5Q8N196 AC092171.4-201ENST00000609130 632 ntBASIC23.84■■□□□ 1.41
SIX5Q8N196 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIX5Q8N196 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SIX5Q8N196 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIX5Q8N196 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIX5Q8N196 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SIX5Q8N196 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SIX5Q8N196 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SIX5Q8N196 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SIX5Q8N196 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SIX5Q8N196 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIX5Q8N196 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.82■■□□□ 1.4
SIX5Q8N196 AC027682.1-201ENST00000562846 899 ntBASIC23.82■■□□□ 1.4
SIX5Q8N196 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SIX5Q8N196 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.82■■□□□ 1.4
SIX5Q8N196 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIX5Q8N196 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIX5Q8N196 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIX5Q8N196 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SIX5Q8N196 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SIX5Q8N196 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIX5Q8N196 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SIX5Q8N196 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SIX5Q8N196 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIX5Q8N196 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.81■■□□□ 1.4
SIX5Q8N196 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIX5Q8N196 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIX5Q8N196 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIX5Q8N196 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SIX5Q8N196 IRS3P-201ENST00000223076 1006 ntBASIC23.8■■□□□ 1.4
SIX5Q8N196 AC090192.1-201ENST00000517740 490 ntBASIC23.8■■□□□ 1.4
SIX5Q8N196 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.8■■□□□ 1.4
SIX5Q8N196 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIX5Q8N196 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.8■■□□□ 1.4
SIX5Q8N196 AC005703.6-201ENST00000623265 1329 ntBASIC23.8■■□□□ 1.4
SIX5Q8N196 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIX5Q8N196 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIX5Q8N196 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIX5Q8N196 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SIX5Q8N196 SERBP1P1-201ENST00000396021 1160 ntBASIC23.79■■□□□ 1.4
SIX5Q8N196 AC008764.7-201ENST00000593779 1081 ntBASIC23.79■■□□□ 1.4
SIX5Q8N196 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIX5Q8N196 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIX5Q8N196 RARRES2P11-201ENST00000635158 484 ntBASIC23.78■■□□□ 1.4
SIX5Q8N196 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.78■■□□□ 1.4
SIX5Q8N196 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.77■■□□□ 1.4
SIX5Q8N196 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SIX5Q8N196 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SIX5Q8N196 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.76■■□□□ 1.39
SIX5Q8N196 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.76■■□□□ 1.39
SIX5Q8N196 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.76■■□□□ 1.39
SIX5Q8N196 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SIX5Q8N196 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SIX5Q8N196 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SIX5Q8N196 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.76■■□□□ 1.39
SIX5Q8N196 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.76■■□□□ 1.39
SIX5Q8N196 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
SIX5Q8N196 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SIX5Q8N196 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SIX5Q8N196 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SIX5Q8N196 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.75■■□□□ 1.39
SIX5Q8N196 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.75■■□□□ 1.39
SIX5Q8N196 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.75■■□□□ 1.39
SIX5Q8N196 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIX5Q8N196 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.75■■□□□ 1.39
SIX5Q8N196 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SIX5Q8N196 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SIX5Q8N196 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SIX5Q8N196 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.74■■□□□ 1.39
SIX5Q8N196 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.74■■□□□ 1.39
SIX5Q8N196 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.74■■□□□ 1.39
SIX5Q8N196 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
SIX5Q8N196 AC099791.1-201ENST00000416440 715 ntBASIC23.74■■□□□ 1.39
SIX5Q8N196 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.74■■□□□ 1.39
SIX5Q8N196 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.74■■□□□ 1.39
SIX5Q8N196 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.74■■□□□ 1.39
SIX5Q8N196 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.74■■□□□ 1.39
SIX5Q8N196 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms