Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.89■■■□□ 2.22
SMC5Q8IY18 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMC5Q8IY18 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
SMC5Q8IY18 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMC5Q8IY18 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
SMC5Q8IY18 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMC5Q8IY18 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.87■■■□□ 2.21
SMC5Q8IY18 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
SMC5Q8IY18 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.87■■■□□ 2.21
SMC5Q8IY18 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMC5Q8IY18 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.86■■■□□ 2.21
SMC5Q8IY18 NTF6A-201ENST00000591175 560 ntBASIC28.86■■■□□ 2.21
SMC5Q8IY18 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
SMC5Q8IY18 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
SMC5Q8IY18 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.86■■■□□ 2.21
SMC5Q8IY18 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
SMC5Q8IY18 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMC5Q8IY18 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SMC5Q8IY18 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.85■■■□□ 2.21
SMC5Q8IY18 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.85■■■□□ 2.21
SMC5Q8IY18 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.85■■■□□ 2.21
SMC5Q8IY18 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SMC5Q8IY18 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.85■■■□□ 2.21
SMC5Q8IY18 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.85■■■□□ 2.21
SMC5Q8IY18 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.85■■■□□ 2.21
SMC5Q8IY18 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMC5Q8IY18 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMC5Q8IY18 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.84■■■□□ 2.21
SMC5Q8IY18 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMC5Q8IY18 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMC5Q8IY18 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMC5Q8IY18 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SMC5Q8IY18 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SMC5Q8IY18 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.84■■■□□ 2.21
SMC5Q8IY18 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMC5Q8IY18 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMC5Q8IY18 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMC5Q8IY18 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.83■■■□□ 2.21
SMC5Q8IY18 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMC5Q8IY18 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.83■■■□□ 2.2
SMC5Q8IY18 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.82■■■□□ 2.2
SMC5Q8IY18 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMC5Q8IY18 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.82■■■□□ 2.2
SMC5Q8IY18 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMC5Q8IY18 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMC5Q8IY18 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMC5Q8IY18 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
SMC5Q8IY18 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMC5Q8IY18 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMC5Q8IY18 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SMC5Q8IY18 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.81■■■□□ 2.2
SMC5Q8IY18 AC019171.1-201ENST00000601251 1056 ntBASIC28.81■■■□□ 2.2
SMC5Q8IY18 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMC5Q8IY18 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMC5Q8IY18 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMC5Q8IY18 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.8■■■□□ 2.2
SMC5Q8IY18 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMC5Q8IY18 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.8■■■□□ 2.2
SMC5Q8IY18 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMC5Q8IY18 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.8■■■□□ 2.2
SMC5Q8IY18 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
SMC5Q8IY18 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMC5Q8IY18 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMC5Q8IY18 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SMC5Q8IY18 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SMC5Q8IY18 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.79■■■□□ 2.2
SMC5Q8IY18 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SMC5Q8IY18 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SMC5Q8IY18 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.78■■■□□ 2.2
SMC5Q8IY18 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMC5Q8IY18 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SMC5Q8IY18 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
SMC5Q8IY18 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SMC5Q8IY18 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.77■■■□□ 2.2
SMC5Q8IY18 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.2
SMC5Q8IY18 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SMC5Q8IY18 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SMC5Q8IY18 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.76■■■□□ 2.19
SMC5Q8IY18 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SMC5Q8IY18 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.76■■■□□ 2.19
SMC5Q8IY18 DUX4L18-201ENST00000553347 1267 ntBASIC28.76■■■□□ 2.19
SMC5Q8IY18 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMC5Q8IY18 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
SMC5Q8IY18 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMC5Q8IY18 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.76■■■□□ 2.19
SMC5Q8IY18 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMC5Q8IY18 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMC5Q8IY18 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMC5Q8IY18 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SMC5Q8IY18 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMC5Q8IY18 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMC5Q8IY18 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms