Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CROCCP3Q8IVE0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 AL137060.1-201ENST00000618151 2648 ntBASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CROCCP3Q8IVE0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CROCCP3Q8IVE0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CROCCP3Q8IVE0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CROCCP3Q8IVE0 AC136428.2-201ENST00000563187 214 ntBASIC20.95■□□□□ 0.94
CROCCP3Q8IVE0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CROCCP3Q8IVE0 ECEL1P1-201ENST00000373592 1742 ntBASIC20.95■□□□□ 0.94
CROCCP3Q8IVE0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.94■□□□□ 0.94
CROCCP3Q8IVE0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CROCCP3Q8IVE0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 GUSBP5-202ENST00000510805 1989 ntBASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 AC097358.2-201ENST00000607541 1159 ntBASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 AC092667.1-201ENST00000434301 2586 ntBASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CROCCP3Q8IVE0 RNF165-205ENST00000588679 2904 ntBASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CROCCP3Q8IVE0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CROCCP3Q8IVE0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CROCCP3Q8IVE0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
CROCCP3Q8IVE0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CROCCP3Q8IVE0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CROCCP3Q8IVE0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CROCCP3Q8IVE0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms