Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AC142472.1-201ENST00000612013 1741 ntBASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 AC092667.1-201ENST00000434301 2586 ntBASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 LINC00526-201ENST00000581067 1875 ntBASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 FOXO3B-201ENST00000395675 1928 ntBASIC18.61■□□□□ 0.57
TMEM88Q6PEY1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM88Q6PEY1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM88Q6PEY1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM88Q6PEY1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM88Q6PEY1 AC108673.1-201ENST00000510422 1159 ntBASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 AC073130.3-201ENST00000624389 2278 ntBASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 DUSP8P3-201ENST00000399571 1760 ntBASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 AC127496.7-201ENST00000625110 1798 ntBASIC18.58■□□□□ 0.56
TMEM88Q6PEY1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM88Q6PEY1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 ABHD17AP4-201ENST00000411545 909 ntBASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 AC004812.2-201ENST00000611079 2094 ntBASIC18.56■□□□□ 0.56
TMEM88Q6PEY1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.55■□□□□ 0.56
TMEM88Q6PEY1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 MIR6090-201ENST00000622481 60 ntBASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 AC141586.4-201ENST00000624558 1573 ntBASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88Q6PEY1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms