Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPL54Q6P161 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MRPL54Q6P161 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPL54Q6P161 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPL54Q6P161 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPL54Q6P161 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.49■□□□□ 0.39
MRPL54Q6P161 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPL54Q6P161 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL54Q6P161 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.48■□□□□ 0.39
MRPL54Q6P161 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.47■□□□□ 0.39
MRPL54Q6P161 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPL54Q6P161 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPL54Q6P161 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRPL54Q6P161 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.47■□□□□ 0.39
MRPL54Q6P161 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.47■□□□□ 0.39
MRPL54Q6P161 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPL54Q6P161 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRPL54Q6P161 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MRPL54Q6P161 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.47■□□□□ 0.39
MRPL54Q6P161 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.47■□□□□ 0.39
MRPL54Q6P161 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MRPL54Q6P161 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.46■□□□□ 0.39
MRPL54Q6P161 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
MRPL54Q6P161 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MRPL54Q6P161 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MRPL54Q6P161 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
MRPL54Q6P161 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
MRPL54Q6P161 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MRPL54Q6P161 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.45■□□□□ 0.38
MRPL54Q6P161 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL54Q6P161 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
MRPL54Q6P161 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL54Q6P161 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL54Q6P161 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
MRPL54Q6P161 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL54Q6P161 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.44■□□□□ 0.38
MRPL54Q6P161 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.44■□□□□ 0.38
MRPL54Q6P161 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL54Q6P161 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.44■□□□□ 0.38
MRPL54Q6P161 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.44■□□□□ 0.38
MRPL54Q6P161 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.44■□□□□ 0.38
MRPL54Q6P161 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL54Q6P161 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MRPL54Q6P161 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.43■□□□□ 0.38
MRPL54Q6P161 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.43■□□□□ 0.38
MRPL54Q6P161 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MRPL54Q6P161 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MRPL54Q6P161 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
MRPL54Q6P161 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPL54Q6P161 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
MRPL54Q6P161 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPL54Q6P161 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL54Q6P161 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MRPL54Q6P161 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.41■□□□□ 0.38
MRPL54Q6P161 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
MRPL54Q6P161 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 AC005559.1-201ENST00000589661 871 ntBASIC17.41■□□□□ 0.38
MRPL54Q6P161 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL54Q6P161 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms