Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.15■■■□□ 2.1
PDS5AQ29RF7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PDS5AQ29RF7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PDS5AQ29RF7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDS5AQ29RF7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.14■■■□□ 2.09
PDS5AQ29RF7 AL356740.2-201ENST00000601559 647 ntBASIC28.14■■■□□ 2.09
PDS5AQ29RF7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDS5AQ29RF7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDS5AQ29RF7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.13■■■□□ 2.09
PDS5AQ29RF7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDS5AQ29RF7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDS5AQ29RF7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.13■■■□□ 2.09
PDS5AQ29RF7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDS5AQ29RF7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDS5AQ29RF7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
PDS5AQ29RF7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDS5AQ29RF7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDS5AQ29RF7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDS5AQ29RF7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDS5AQ29RF7 AL512631.2-201ENST00000604634 923 ntBASIC28.12■■■□□ 2.09
PDS5AQ29RF7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDS5AQ29RF7 AC131274.2-201ENST00000580697 1507 ntBASIC28.1■■■□□ 2.09
PDS5AQ29RF7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.1■■■□□ 2.09
PDS5AQ29RF7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
PDS5AQ29RF7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.08■■■□□ 2.09
PDS5AQ29RF7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
PDS5AQ29RF7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
PDS5AQ29RF7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.07■■■□□ 2.08
PDS5AQ29RF7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDS5AQ29RF7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
PDS5AQ29RF7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
PDS5AQ29RF7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.05■■■□□ 2.08
PDS5AQ29RF7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PDS5AQ29RF7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PDS5AQ29RF7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PDS5AQ29RF7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PDS5AQ29RF7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PDS5AQ29RF7 MIR4466-201ENST00000606121 54 ntBASIC28.04■■■□□ 2.08
PDS5AQ29RF7 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.04■■■□□ 2.08
PDS5AQ29RF7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
PDS5AQ29RF7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDS5AQ29RF7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PDS5AQ29RF7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PDS5AQ29RF7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PDS5AQ29RF7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms