Protein–RNA interactions for Protein: Q15822

CHRNA2, Neuronal acetylcholine receptor subunit alpha-2, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2Q15822 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.37■■■□□ 2.61
CHRNA2Q15822 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHRNA2Q15822 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHRNA2Q15822 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.36■■■□□ 2.61
CHRNA2Q15822 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHRNA2Q15822 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CHRNA2Q15822 CA15P2-201ENST00000611168 834 ntBASIC31.36■■■□□ 2.61
CHRNA2Q15822 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CHRNA2Q15822 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHRNA2Q15822 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA2Q15822 AC004448.1-201ENST00000458332 883 ntBASIC31.35■■■□□ 2.61
CHRNA2Q15822 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.35■■■□□ 2.61
CHRNA2Q15822 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.35■■■□□ 2.61
CHRNA2Q15822 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.35■■■□□ 2.61
CHRNA2Q15822 SYT6-210ENST00000641643 1587 ntBASIC31.34■■■□□ 2.61
CHRNA2Q15822 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.34■■■□□ 2.61
CHRNA2Q15822 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.34■■■□□ 2.61
CHRNA2Q15822 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.34■■■□□ 2.61
CHRNA2Q15822 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.34■■■□□ 2.61
CHRNA2Q15822 DUX4L19-201ENST00000557448 1267 ntBASIC31.34■■■□□ 2.61
CHRNA2Q15822 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.34■■■□□ 2.61
CHRNA2Q15822 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.34■■■□□ 2.61
CHRNA2Q15822 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.33■■■□□ 2.61
CHRNA2Q15822 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHRNA2Q15822 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.33■■■□□ 2.61
CHRNA2Q15822 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CHRNA2Q15822 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHRNA2Q15822 SERBP1P1-201ENST00000396021 1160 ntBASIC31.31■■■□□ 2.6
CHRNA2Q15822 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.31■■■□□ 2.6
CHRNA2Q15822 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
CHRNA2Q15822 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHRNA2Q15822 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
CHRNA2Q15822 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CHRNA2Q15822 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHRNA2Q15822 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.3■■■□□ 2.6
CHRNA2Q15822 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHRNA2Q15822 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.3■■■□□ 2.6
CHRNA2Q15822 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA2Q15822 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA2Q15822 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA2Q15822 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA2Q15822 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.29■■■□□ 2.6
CHRNA2Q15822 RASA4CP-201ENST00000424092 1398 ntBASIC31.29■■■□□ 2.6
CHRNA2Q15822 AC005703.6-201ENST00000623265 1329 ntBASIC31.28■■■□□ 2.6
CHRNA2Q15822 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHRNA2Q15822 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHRNA2Q15822 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CHRNA2Q15822 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.28■■■□□ 2.6
CHRNA2Q15822 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.28■■■□□ 2.6
CHRNA2Q15822 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CHRNA2Q15822 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.28■■■□□ 2.6
CHRNA2Q15822 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHRNA2Q15822 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHRNA2Q15822 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.27■■■□□ 2.6
CHRNA2Q15822 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.27■■■□□ 2.6
CHRNA2Q15822 AC096887.2-201ENST00000623443 1957 ntBASIC31.27■■■□□ 2.6
CHRNA2Q15822 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHRNA2Q15822 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.27■■■□□ 2.6
CHRNA2Q15822 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHRNA2Q15822 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CHRNA2Q15822 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHRNA2Q15822 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.26■■■□□ 2.59
CHRNA2Q15822 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHRNA2Q15822 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHRNA2Q15822 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
CHRNA2Q15822 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHRNA2Q15822 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHRNA2Q15822 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHRNA2Q15822 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHRNA2Q15822 AC008764.7-201ENST00000593779 1081 ntBASIC31.24■■■□□ 2.59
CHRNA2Q15822 AC099791.2-201ENST00000605725 427 ntBASIC31.24■■■□□ 2.59
CHRNA2Q15822 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CHRNA2Q15822 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA2Q15822 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.23■■■□□ 2.59
CHRNA2Q15822 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA2Q15822 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA2Q15822 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA2Q15822 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA2Q15822 ERN1-208ENST00000606895 2068 ntBASIC31.23■■■□□ 2.59
CHRNA2Q15822 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.22■■■□□ 2.59
CHRNA2Q15822 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CHRNA2Q15822 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.22■■■□□ 2.59
CHRNA2Q15822 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA2Q15822 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.22■■■□□ 2.59
CHRNA2Q15822 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHRNA2Q15822 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.21■■■□□ 2.59
CHRNA2Q15822 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.21■■■□□ 2.59
CHRNA2Q15822 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.21■■■□□ 2.59
CHRNA2Q15822 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
CHRNA2Q15822 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHRNA2Q15822 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHRNA2Q15822 AC097639.1-201ENST00000565519 1891 ntBASIC31.21■■■□□ 2.59
CHRNA2Q15822 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.2■■■□□ 2.59
CHRNA2Q15822 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.2■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms