Protein–RNA interactions for Protein: Q07666

KHDRBS1, KH domain-containing, RNA-binding, signal transduction-associated protein 1, humanhuman

Known RBP eCLIP

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1Q07666 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.137e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-210ENST00000463282 3422 ntTSL 1 (best)15.83■□□□□ 0.127e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-237ENST00000533837 3492 ntTSL 1 (best)15.73■□□□□ 0.117e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.087e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.51■□□□□ 0.077e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.36■□□□□ 0.057e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-204ENST00000367812 3565 ntTSL 1 (best)15.36■□□□□ 0.057e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.36■□□□□ 0.057e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-232ENST00000531737 2436 ntTSL 1 (best)7.7□□□□□ -1.187e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-216ENST00000525940 1838 ntTSL 1 (best)7.08□□□□□ -1.287e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-231ENST00000531634 1824 ntTSL 1 (best)7.08□□□□□ -1.287e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.08□□□□□ -1.287e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.08□□□□□ -1.287e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-234ENST00000533384 2521 ntTSL 1 (best)6.64□□□□□ -1.357e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-227ENST00000529262 2427 ntTSL 1 (best)6.57□□□□□ -1.367e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-219ENST00000526565 2399 ntTSL 1 (best)6.46□□□□□ -1.377e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.37□□□□□ -1.397e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-236ENST00000533808 3349 ntTSL 1 (best)6.29□□□□□ -1.47e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-225ENST00000528345 1973 ntTSL 1 (best)6.11□□□□□ -1.437e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-218ENST00000526320 3081 ntTSL 1 (best)6.09□□□□□ -1.447e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-212ENST00000525002 2182 ntTSL 1 (best)5.38□□□□□ -1.557e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-217ENST00000526187 2192 ntTSL 1 (best)5.38□□□□□ -1.557e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.37□□□□□ -1.557e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-223ENST00000528140 2021 ntTSL 1 (best)5.28□□□□□ -1.567e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-233ENST00000531845 3230 ntTSL 25.09□□□□□ -1.597e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-211ENST00000524588 1630 ntTSL 1 (best)4.76□□□□□ -1.657e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-207ENST00000430686 1036 ntTSL 54.72□□□□□ -1.657e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-215ENST00000525514 3288 ntTSL 1 (best)4.71□□□□□ -1.657e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-224ENST00000528343 2091 ntTSL 1 (best)4.69□□□□□ -1.667e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.667e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.49□□□□□ -1.697e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-222ENST00000528015 2201 ntTSL 1 (best)4.41□□□□□ -1.77e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-208ENST00000438901 3481 ntTSL 1 (best)4.18□□□□□ -1.747e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-220ENST00000526889 3157 ntTSL 1 (best)4.13□□□□□ -1.757e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-229ENST00000529586 3203 ntTSL 1 (best)4.02□□□□□ -1.777e-10■□□□□ 9.7
KHDRBS1Q07666 MYB-230ENST00000531519 2911 ntTSL 1 (best)3.75□□□□□ -1.817e-10■□□□□ 9.7
KHDRBS1Q07666 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.56□□□□□ -0.884e-9■□□□□ 9.6
KHDRBS1Q07666 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.944e-9■□□□□ 9.6
KHDRBS1Q07666 LINC01029-203ENST00000582805 788 ntTSL 1 (best)12.09□□□□□ -0.477e-7■□□□□ 9.6
KHDRBS1Q07666 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.21■□□□□ 0.511e-7■□□□□ 9.6
KHDRBS1Q07666 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.931e-7■□□□□ 9.6
KHDRBS1Q07666 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.024e-8■□□□□ 9.5
KHDRBS1Q07666 TMED5-203ENST00000370290 3847 ntTSL 1 (best)10.65□□□□□ -0.714e-8■□□□□ 9.5
KHDRBS1Q07666 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.342e-7■□□□□ 9.5
KHDRBS1Q07666 C21orf58-209ENST00000475776 2178 ntTSL 1 (best)16.96■□□□□ 0.312e-7■□□□□ 9.5
KHDRBS1Q07666 C21orf58-207ENST00000445935 1931 ntAPPRIS ALT2 TSL 1 (best)16.74■□□□□ 0.272e-7■□□□□ 9.5
KHDRBS1Q07666 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.092e-7■□□□□ 9.5
KHDRBS1Q07666 HNRNPR-213ENST00000641107 646 nt14.19□□□□□ -0.141e-8■□□□□ 9.5
KHDRBS1Q07666 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.142e-7■□□□□ 9.5
KHDRBS1Q07666 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.15□□□□□ -1.111e-8■□□□□ 9.5
KHDRBS1Q07666 HNRNPR-206ENST00000464516 557 ntTSL 27.15□□□□□ -1.261e-8■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-210ENST00000438032 1159 ntTSL 516.88■□□□□ 0.295e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.255e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-208ENST00000424732 970 ntTSL 315.16■□□□□ 0.025e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-205ENST00000417710 572 ntTSL 57.02□□□□□ -1.295e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.295e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-212ENST00000487117 1598 ntTSL 26.21□□□□□ -1.425e-11■□□□□ 9.5
KHDRBS1Q07666 HP1BP3-207ENST00000419948 759 ntTSL 55.49□□□□□ -1.535e-11■□□□□ 9.5
KHDRBS1Q07666 ZNF655-219ENST00000467680 1979 ntTSL 217.12■□□□□ 0.332e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.282e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-210ENST00000422647 573 ntTSL 416.73■□□□□ 0.272e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-214ENST00000427931 567 ntTSL 416.73■□□□□ 0.272e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.95■□□□□ 0.142e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.72■□□□□ 0.112e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-206ENST00000416144 1496 ntTSL 315.68■□□□□ 0.12e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.42■□□□□ 0.062e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.032e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.34□□□□□ -0.112e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.192e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-205ENST00000412636 655 ntTSL 213.79□□□□□ -0.22e-6■□□□□ 9.5
KHDRBS1Q07666 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.22e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-223ENST00000493947 593 ntTSL 413.79□□□□□ -0.22e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-211ENST00000423973 1441 ntTSL 1 (best)13.67□□□□□ -0.222e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.99□□□□□ -0.332e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-208ENST00000422164 793 ntTSL 212.92□□□□□ -0.342e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.642e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.44□□□□□ -1.222e-6■□□□□ 9.5
KHDRBS1Q07666 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.362e-6■□□□□ 9.5
KHDRBS1Q07666 MARCH6-214ENST00000606497 1334 ntTSL 45.23□□□□□ -1.571e-7■□□□□ 9.4
KHDRBS1Q07666 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.93□□□□□ -0.181e-323■□□□□ 9.4
KHDRBS1Q07666 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.64□□□□□ -1.511e-323■□□□□ 9.4
KHDRBS1Q07666 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.49□□□□□ -1.531e-323■□□□□ 9.4
KHDRBS1Q07666 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.811e-323■□□□□ 9.4
KHDRBS1Q07666 GABPB1-AS1-203ENST00000558593 507 ntTSL 56.66□□□□□ -1.343e-8■□□□□ 9.4
KHDRBS1Q07666 HIST1H3J-202ENST00000479986 522 ntTSL 218.79■□□□□ 0.64e-9■□□□□ 9.4
KHDRBS1Q07666 FUS-209ENST00000566605 1787 ntTSL 1 (best)23.78■■□□□ 1.42e-6■□□□□ 9.3
KHDRBS1Q07666 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.132e-6■□□□□ 9.3
KHDRBS1Q07666 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.732e-6■□□□□ 9.3
KHDRBS1Q07666 FUS-203ENST00000474990 827 ntTSL 318.98■□□□□ 0.632e-6■□□□□ 9.3
KHDRBS1Q07666 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.152e-6■□□□□ 9.3
KHDRBS1Q07666 FUS-206ENST00000487509 4920 ntTSL 214.17□□□□□ -0.142e-6■□□□□ 9.3
KHDRBS1Q07666 WDR26-206ENST00000479778 2552 ntTSL 24.39□□□□□ -1.714e-7■□□□□ 9.3
KHDRBS1Q07666 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.06□□□□□ -0.161e-9■□□□□ 9.3
KHDRBS1Q07666 TRIT1-209ENST00000486825 850 ntTSL 513.31□□□□□ -0.282e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.27□□□□□ -0.292e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.01□□□□□ -0.332e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-205ENST00000462797 2000 ntTSL 512.82□□□□□ -0.362e-7■□□□□ 9.3
KHDRBS1Q07666 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.432e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.582e-7■□□□□ 9.3
KHDRBS1Q07666 TRIT1-212ENST00000492612 983 ntTSL 510.14□□□□□ -0.792e-7■□□□□ 9.3
Retrieved 100 of 2,417 protein–RNA pairs in 80.5 ms