Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2NP61088 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2NP61088 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBE2NP61088 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE2NP61088 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2NP61088 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2NP61088 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2NP61088 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.36■□□□□ 0.85
UBE2NP61088 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE2NP61088 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE2NP61088 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UBE2NP61088 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UBE2NP61088 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBE2NP61088 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2NP61088 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2NP61088 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UBE2NP61088 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2NP61088 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE2NP61088 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2NP61088 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE2NP61088 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE2NP61088 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2NP61088 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2NP61088 AC020928.2-201ENST00000588717 2197 ntBASIC20.34■□□□□ 0.85
UBE2NP61088 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.34■□□□□ 0.85
UBE2NP61088 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2NP61088 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE2NP61088 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE2NP61088 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE2NP61088 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2NP61088 AC142381.3-201ENST00000568208 1670 ntBASIC20.33■□□□□ 0.85
UBE2NP61088 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2NP61088 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2NP61088 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBE2NP61088 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE2NP61088 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.33■□□□□ 0.84
UBE2NP61088 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.33■□□□□ 0.84
UBE2NP61088 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2NP61088 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2NP61088 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.33■□□□□ 0.84
UBE2NP61088 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2NP61088 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE2NP61088 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
UBE2NP61088 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
UBE2NP61088 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.32■□□□□ 0.84
UBE2NP61088 MIR4787-201ENST00000607364 84 ntBASIC20.32■□□□□ 0.84
UBE2NP61088 AP003733.4-201ENST00000623785 1697 ntBASIC20.32■□□□□ 0.84
UBE2NP61088 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2NP61088 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE2NP61088 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.31■□□□□ 0.84
UBE2NP61088 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2NP61088 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE2NP61088 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.31■□□□□ 0.84
UBE2NP61088 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE2NP61088 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
UBE2NP61088 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE2NP61088 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2NP61088 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2NP61088 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2NP61088 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2NP61088 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2NP61088 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE2NP61088 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE2NP61088 AC021242.3-201ENST00000607598 1377 ntBASIC20.3■□□□□ 0.84
UBE2NP61088 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2NP61088 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
UBE2NP61088 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2NP61088 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBE2NP61088 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE2NP61088 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2NP61088 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBE2NP61088 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2NP61088 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE2NP61088 AF131216.4-201ENST00000638924 1588 ntBASIC20.29■□□□□ 0.84
UBE2NP61088 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBE2NP61088 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
UBE2NP61088 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2NP61088 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2NP61088 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2NP61088 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UBE2NP61088 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2NP61088 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2NP61088 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2NP61088 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms