Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN18P56856 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.85■□□□□ 0.93
CLDN18P56856 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN18P56856 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN18P56856 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN18P56856 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN18P56856 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN18P56856 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLDN18P56856 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.84■□□□□ 0.93
CLDN18P56856 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CLDN18P56856 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN18P56856 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN18P56856 MTDHP2-201ENST00000601468 714 ntBASIC20.84■□□□□ 0.93
CLDN18P56856 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN18P56856 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CLDN18P56856 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN18P56856 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN18P56856 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
CLDN18P56856 SNX5-217ENST00000606557 1087 ntBASIC20.83■□□□□ 0.93
CLDN18P56856 AC010997.5-201ENST00000609182 354 ntBASIC20.83■□□□□ 0.93
CLDN18P56856 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.83■□□□□ 0.93
CLDN18P56856 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN18P56856 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CLDN18P56856 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CLDN18P56856 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CLDN18P56856 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN18P56856 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN18P56856 AC022211.4-201ENST00000625094 2161 ntBASIC20.82■□□□□ 0.92
CLDN18P56856 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN18P56856 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN18P56856 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN18P56856 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN18P56856 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN18P56856 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN18P56856 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN18P56856 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN18P56856 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN18P56856 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLDN18P56856 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN18P56856 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN18P56856 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN18P56856 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN18P56856 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN18P56856 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLDN18P56856 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN18P56856 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN18P56856 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN18P56856 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN18P56856 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLDN18P56856 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN18P56856 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CLDN18P56856 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN18P56856 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN18P56856 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN18P56856 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN18P56856 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN18P56856 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN18P56856 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN18P56856 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN18P56856 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN18P56856 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN18P56856 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN18P56856 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN18P56856 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN18P56856 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN18P56856 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN18P56856 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN18P56856 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN18P56856 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN18P56856 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN18P56856 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN18P56856 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN18P56856 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN18P56856 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN18P56856 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.77■□□□□ 0.91
CLDN18P56856 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN18P56856 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN18P56856 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLDN18P56856 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLDN18P56856 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN18P56856 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN18P56856 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN18P56856 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN18P56856 AC004448.1-201ENST00000458332 883 ntBASIC20.76■□□□□ 0.91
CLDN18P56856 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN18P56856 MIR6724-1-201ENST00000616420 92 ntBASIC20.76■□□□□ 0.91
CLDN18P56856 MIR6724-2-201ENST00000616483 92 ntBASIC20.76■□□□□ 0.91
CLDN18P56856 MIR6724-4-201ENST00000617390 92 ntBASIC20.76■□□□□ 0.91
CLDN18P56856 MIR6724-3-201ENST00000622482 92 ntBASIC20.76■□□□□ 0.91
CLDN18P56856 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.76■□□□□ 0.91
CLDN18P56856 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN18P56856 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms