Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH11P55287 DUX4L9-201ENST00000449051 1259 ntBASIC21.15■□□□□ 0.98
CDH11P55287 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDH11P55287 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH11P55287 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH11P55287 AC068473.5-201ENST00000616428 2072 ntBASIC21.15■□□□□ 0.98
CDH11P55287 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH11P55287 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH11P55287 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH11P55287 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDH11P55287 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH11P55287 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH11P55287 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH11P55287 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH11P55287 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDH11P55287 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
CDH11P55287 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH11P55287 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDH11P55287 AC004812.2-201ENST00000611079 2094 ntBASIC21.14■□□□□ 0.97
CDH11P55287 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH11P55287 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH11P55287 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH11P55287 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH11P55287 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH11P55287 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH11P55287 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH11P55287 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH11P55287 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH11P55287 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH11P55287 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH11P55287 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
CDH11P55287 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH11P55287 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH11P55287 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH11P55287 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH11P55287 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH11P55287 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH11P55287 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDH11P55287 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.12■□□□□ 0.97
CDH11P55287 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 MIR6089-201ENST00000616698 64 ntBASIC21.12■□□□□ 0.97
CDH11P55287 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH11P55287 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH11P55287 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CDH11P55287 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH11P55287 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH11P55287 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDH11P55287 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH11P55287 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH11P55287 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH11P55287 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDH11P55287 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CDH11P55287 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH11P55287 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH11P55287 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH11P55287 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH11P55287 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH11P55287 DUSP8P5-201ENST00000422884 1815 ntBASIC21.09■□□□□ 0.97
CDH11P55287 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH11P55287 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDH11P55287 SPCS2P3-201ENST00000500401 656 ntBASIC21.09■□□□□ 0.97
CDH11P55287 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDH11P55287 BHLHE23-202ENST00000612929 1109 ntBASIC21.09■□□□□ 0.97
CDH11P55287 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDH11P55287 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH11P55287 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH11P55287 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CDH11P55287 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
CDH11P55287 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH11P55287 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDH11P55287 RARRES2P1-201ENST00000474487 481 ntBASIC21.08■□□□□ 0.97
CDH11P55287 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH11P55287 MIR6765-201ENST00000614092 87 ntBASIC21.08■□□□□ 0.97
CDH11P55287 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH11P55287 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH11P55287 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH11P55287 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH11P55287 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH11P55287 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH11P55287 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
CDH11P55287 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH11P55287 AC018755.3-202ENST00000596210 929 ntBASIC21.07■□□□□ 0.96
CDH11P55287 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms