Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NR1H2P55055 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NR1H2P55055 EP400NL-214ENST00000641289 2402 ntBASIC21.81■■□□□ 1.08
NR1H2P55055 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.81■■□□□ 1.08
NR1H2P55055 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.81■■□□□ 1.08
NR1H2P55055 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NR1H2P55055 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.81■■□□□ 1.08
NR1H2P55055 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NR1H2P55055 AC012354.3-201ENST00000623734 483 ntBASIC21.81■■□□□ 1.08
NR1H2P55055 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NR1H2P55055 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NR1H2P55055 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.8■■□□□ 1.08
NR1H2P55055 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NR1H2P55055 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.79■■□□□ 1.08
NR1H2P55055 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NR1H2P55055 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1H2P55055 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NR1H2P55055 ABCB10P4-201ENST00000566803 2184 ntBASIC21.78■■□□□ 1.08
NR1H2P55055 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NR1H2P55055 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1H2P55055 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NR1H2P55055 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NR1H2P55055 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NR1H2P55055 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.78■■□□□ 1.08
NR1H2P55055 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1H2P55055 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1H2P55055 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.78■■□□□ 1.08
NR1H2P55055 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1H2P55055 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NR1H2P55055 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.78■■□□□ 1.08
NR1H2P55055 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NR1H2P55055 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.77■■□□□ 1.08
NR1H2P55055 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1H2P55055 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NR1H2P55055 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NR1H2P55055 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
NR1H2P55055 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.76■■□□□ 1.07
NR1H2P55055 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.76■■□□□ 1.07
NR1H2P55055 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.76■■□□□ 1.07
NR1H2P55055 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NR1H2P55055 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NR1H2P55055 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1H2P55055 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NR1H2P55055 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1H2P55055 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1H2P55055 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1H2P55055 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.75■■□□□ 1.07
NR1H2P55055 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NR1H2P55055 AC233723.2-201ENST00000623798 2106 ntBASIC21.75■■□□□ 1.07
NR1H2P55055 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1H2P55055 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1H2P55055 AC004812.2-201ENST00000611079 2094 ntBASIC21.75■■□□□ 1.07
NR1H2P55055 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NR1H2P55055 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.74■■□□□ 1.07
NR1H2P55055 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NR1H2P55055 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1H2P55055 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NR1H2P55055 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NR1H2P55055 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.74■■□□□ 1.07
NR1H2P55055 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.74■■□□□ 1.07
NR1H2P55055 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NR1H2P55055 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NR1H2P55055 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NR1H2P55055 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NR1H2P55055 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.73■■□□□ 1.07
NR1H2P55055 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.73■■□□□ 1.07
NR1H2P55055 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NR1H2P55055 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H2P55055 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H2P55055 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H2P55055 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.72■■□□□ 1.07
NR1H2P55055 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.72■■□□□ 1.07
NR1H2P55055 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H2P55055 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms