Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 SNX3YOR357C 489 nt7.45□□□□□ -1.22
TY1A-JR2P47099 OXR1YPL196W 822 nt7.45□□□□□ -1.22
TY1A-JR2P47099 NRG2YBR066C 663 nt7.45□□□□□ -1.22
TY1A-JR2P47099 BNI5YNL166C 1347 nt7.45□□□□□ -1.22
TY1A-JR2P47099 TYR1YBR166C 1359 nt7.45□□□□□ -1.22
TY1A-JR2P47099 SET4YJL105W 1683 nt7.44□□□□□ -1.22
TY1A-JR2P47099 CRF1YDR223W 1404 nt7.44□□□□□ -1.22
TY1A-JR2P47099 YDL186WYDL186W 834 nt7.44□□□□□ -1.22
TY1A-JR2P47099 tE(CUC)DtE(CUC)D 72 nt7.44□□□□□ -1.22
TY1A-JR2P47099 tE(CUC)ItE(CUC)I 72 nt7.44□□□□□ -1.22
TY1A-JR2P47099 BRR6YGL247W 594 nt7.44□□□□□ -1.22
TY1A-JR2P47099 YHR137C-AYHR137C-A 651 nt7.44□□□□□ -1.22
TY1A-JR2P47099 YJU3YKL094W 942 nt7.44□□□□□ -1.22
TY1A-JR2P47099 TEM1YML064C 738 nt7.44□□□□□ -1.22
TY1A-JR2P47099 ADD37YMR184W 597 nt7.44□□□□□ -1.22
TY1A-JR2P47099 TRI1YMR233W 681 nt7.44□□□□□ -1.22
TY1A-JR2P47099 IZH2YOL002C 954 nt7.44□□□□□ -1.22
TY1A-JR2P47099 SLG1YOR008C 1137 nt7.44□□□□□ -1.22
TY1A-JR2P47099 ORT1YOR130C 879 nt7.44□□□□□ -1.22
TY1A-JR2P47099 ANT1YPR128C 987 nt7.44□□□□□ -1.22
TY1A-JR2P47099 YBR103C-AYBR103C-A 144 nt7.44□□□□□ -1.22
TY1A-JR2P47099 YOS9YDR057W 1629 nt7.44□□□□□ -1.22
TY1A-JR2P47099 FUM1YPL262W 1467 nt7.43□□□□□ -1.22
TY1A-JR2P47099 PRS2YER099C 957 nt7.43□□□□□ -1.22
TY1A-JR2P47099 YER181CYER181C 324 nt7.43□□□□□ -1.22
TY1A-JR2P47099 YER188WYER188W 720 nt7.43□□□□□ -1.22
TY1A-JR2P47099 PNO1YOR145C 825 nt7.43□□□□□ -1.22
TY1A-JR2P47099 MFM1YPL060W 1242 nt7.43□□□□□ -1.22
TY1A-JR2P47099 ERG9YHR190W 1335 nt7.43□□□□□ -1.22
TY1A-JR2P47099 MPE1YKL059C 1326 nt7.43□□□□□ -1.22
TY1A-JR2P47099 STP4YDL048C 1473 nt7.43□□□□□ -1.22
TY1A-JR2P47099 TOM71YHR117W 1920 nt7.42□□□□□ -1.22
TY1A-JR2P47099 PMA2YPL036W 2844 nt7.42□□□□□ -1.22
TY1A-JR2P47099 MSC1YML128C 1542 nt7.42□□□□□ -1.22
TY1A-JR2P47099 POX1YGL205W 2247 nt7.42□□□□□ -1.22
TY1A-JR2P47099 INO2YDR123C 915 nt7.42□□□□□ -1.22
TY1A-JR2P47099 SCM4YGR049W 564 nt7.42□□□□□ -1.22
TY1A-JR2P47099 COX6YHR051W 447 nt7.42□□□□□ -1.22
TY1A-JR2P47099 SOL3YHR163W 750 nt7.42□□□□□ -1.22
TY1A-JR2P47099 CYC1YJR048W 330 nt7.42□□□□□ -1.22
TY1A-JR2P47099 MTD1YKR080W 963 nt7.42□□□□□ -1.22
TY1A-JR2P47099 ENT4YLL038C 744 nt7.42□□□□□ -1.22
TY1A-JR2P47099 COS1YNL336W 1146 nt7.42□□□□□ -1.22
TY1A-JR2P47099 RDL1YOR285W 420 nt7.42□□□□□ -1.22
TY1A-JR2P47099 PRM3YPL192C 402 nt7.42□□□□□ -1.22
TY1A-JR2P47099 ASR1YPR093C 867 nt7.42□□□□□ -1.22
TY1A-JR2P47099 MET30YIL046W 1923 nt7.42□□□□□ -1.22
TY1A-JR2P47099 COQ6YGR255C 1440 nt7.42□□□□□ -1.22
TY1A-JR2P47099 ADE13YLR359W 1449 nt7.42□□□□□ -1.22
TY1A-JR2P47099 CLN1YMR199W 1641 nt7.41□□□□□ -1.22
TY1A-JR2P47099 YDR366CYDR366C 399 nt7.41□□□□□ -1.22
TY1A-JR2P47099 OYE2YHR179W 1203 nt7.41□□□□□ -1.22
TY1A-JR2P47099 YJR071WYJR071W 369 nt7.41□□□□□ -1.22
TY1A-JR2P47099 BOS1YLR078C 735 nt7.41□□□□□ -1.22
TY1A-JR2P47099 YML131WYML131W 1098 nt7.41□□□□□ -1.22
TY1A-JR2P47099 COQ2YNR041C 1119 nt7.41□□□□□ -1.22
TY1A-JR2P47099 snR11snR11 258 nt7.41□□□□□ -1.22
TY1A-JR2P47099 MRPL40YPL173W 894 nt7.41□□□□□ -1.22
TY1A-JR2P47099 MUM2YBR057C 1101 nt7.41□□□□□ -1.22
TY1A-JR2P47099 YCL002CYCL002C 792 nt7.41□□□□□ -1.22
TY1A-JR2P47099 MLF3YNL074C 1359 nt7.41□□□□□ -1.22
TY1A-JR2P47099 UME1YPL139C 1383 nt7.41□□□□□ -1.22
TY1A-JR2P47099 TRP3YKL211C 1455 nt7.41□□□□□ -1.22
TY1A-JR2P47099 CDC3YLR314C 1563 nt7.41□□□□□ -1.22
TY1A-JR2P47099 PET100YDR079W 336 nt7.4□□□□□ -1.22
TY1A-JR2P47099 NOP16YER002W 696 nt7.4□□□□□ -1.22
TY1A-JR2P47099 YER006C-AYER006C-A 318 nt7.4□□□□□ -1.22
TY1A-JR2P47099 MF(ALPHA)2YGL089C 363 nt7.4□□□□□ -1.22
TY1A-JR2P47099 SEH1YGL100W 1050 nt7.4□□□□□ -1.22
TY1A-JR2P47099 QRI5YLR204W 336 nt7.4□□□□□ -1.22
TY1A-JR2P47099 PHO12YHR215W 1404 nt7.4□□□□□ -1.22
TY1A-JR2P47099 PHO11YAR071W 1404 nt7.4□□□□□ -1.22
TY1A-JR2P47099 YLR072WYLR072W 2082 nt7.39□□□□□ -1.23
TY1A-JR2P47099 SAC7YDR389W 1965 nt7.39□□□□□ -1.23
TY1A-JR2P47099 SLX5YDL013W 1860 nt7.39□□□□□ -1.23
TY1A-JR2P47099 NOC4YPR144C 1659 nt7.39□□□□□ -1.23
TY1A-JR2P47099 YMR027WYMR027W 1413 nt7.39□□□□□ -1.23
TY1A-JR2P47099 KRR1YCL059C 951 nt7.39□□□□□ -1.23
TY1A-JR2P47099 MGT1YDL200C 567 nt7.39□□□□□ -1.23
TY1A-JR2P47099 CTH1YDR151C 978 nt7.39□□□□□ -1.23
TY1A-JR2P47099 YGR122WYGR122W 1209 nt7.39□□□□□ -1.23
TY1A-JR2P47099 YGR126WYGR126W 693 nt7.39□□□□□ -1.23
TY1A-JR2P47099 RTA1YGR213C 954 nt7.39□□□□□ -1.23
TY1A-JR2P47099 YGR290WYGR290W 444 nt7.39□□□□□ -1.23
TY1A-JR2P47099 SFC1YJR095W 969 nt7.39□□□□□ -1.23
TY1A-JR2P47099 OSW5YMR148W 447 nt7.39□□□□□ -1.23
TY1A-JR2P47099 ARF3YOR094W 552 nt7.39□□□□□ -1.23
TY1A-JR2P47099 ETR1YBR026C 1143 nt7.39□□□□□ -1.23
TY1A-JR2P47099 TIP1YBR067C 633 nt7.39□□□□□ -1.23
TY1A-JR2P47099 MIG1YGL035C 1515 nt7.38□□□□□ -1.23
TY1A-JR2P47099 YDR210W-AYDR210W-A 1317 nt7.38□□□□□ -1.23
TY1A-JR2P47099 RUB1YDR139C 234 nt7.38□□□□□ -1.23
TY1A-JR2P47099 ICT1YLR099C 1185 nt7.38□□□□□ -1.23
TY1A-JR2P47099 SFH1YLR321C 1281 nt7.38□□□□□ -1.23
TY1A-JR2P47099 RPC19YNL113W 429 nt7.38□□□□□ -1.23
TY1A-JR2P47099 YOR029WYOR029W 336 nt7.38□□□□□ -1.23
TY1A-JR2P47099 MCA1YOR197W 1299 nt7.38□□□□□ -1.23
TY1A-JR2P47099 PFS2YNL317W 1398 nt7.37□□□□□ -1.23
TY1A-JR2P47099 SOL2YCR073W-A 948 nt7.37□□□□□ -1.23
TY1A-JR2P47099 ARG82YDR173C 1068 nt7.37□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 60.1 ms