Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 NOP16YER002W 696 nt6.14□□□□□ -1.43
RPN11P43588 YPL199CYPL199C 723 nt6.14□□□□□ -1.43
RPN11P43588 SSK1YLR006C 2139 nt6.14□□□□□ -1.43
RPN11P43588 SIF2YBR103W 1608 nt6.14□□□□□ -1.43
RPN11P43588 HSF1YGL073W 2502 nt6.14□□□□□ -1.43
RPN11P43588 HXT4YHR092C 1731 nt6.13□□□□□ -1.43
RPN11P43588 ASH1YKL185W 1767 nt6.13□□□□□ -1.43
RPN11P43588 COS6YGR295C 1146 nt6.13□□□□□ -1.43
RPN11P43588 CTR2YHR175W 570 nt6.13□□□□□ -1.43
RPN11P43588 YAR019W-AYAR019W-A 333 nt6.13□□□□□ -1.43
RPN11P43588 YNL174WYNL174W 573 nt6.13□□□□□ -1.43
RPN11P43588 NPT1YOR209C 1290 nt6.13□□□□□ -1.43
RPN11P43588 HMT1YBR034C 1047 nt6.13□□□□□ -1.43
RPN11P43588 CEG1YGL130W 1380 nt6.13□□□□□ -1.43
RPN11P43588 SPS22YCL048W 1392 nt6.13□□□□□ -1.43
RPN11P43588 ALD3YMR169C 1521 nt6.13□□□□□ -1.43
RPN11P43588 ALD2YMR170C 1521 nt6.13□□□□□ -1.43
RPN11P43588 NMD5YJR132W 3147 nt6.12□□□□□ -1.43
RPN11P43588 NIT2YJL126W 924 nt6.12□□□□□ -1.43
RPN11P43588 SRN2YLR119W 642 nt6.12□□□□□ -1.43
RPN11P43588 APS1YLR170C 471 nt6.12□□□□□ -1.43
RPN11P43588 OCA1YNL099C 717 nt6.12□□□□□ -1.43
RPN11P43588 THP1YOL072W 1368 nt6.12□□□□□ -1.43
RPN11P43588 RGS2YOR107W 930 nt6.12□□□□□ -1.43
RPN11P43588 KIP2YPL155C 2121 nt6.12□□□□□ -1.43
RPN11P43588 ADE4YMR300C 1533 nt6.11□□□□□ -1.43
RPN11P43588 YGL152CYGL152C 678 nt6.11□□□□□ -1.43
RPN11P43588 HGH1YGR187C 1185 nt6.11□□□□□ -1.43
RPN11P43588 MND2YIR025W 1107 nt6.11□□□□□ -1.43
RPN11P43588 SWI3YJL176C 2478 nt6.11□□□□□ -1.43
RPN11P43588 YDR401WYDR401W 564 nt6.1□□□□□ -1.43
RPN11P43588 LEM3YNL323W 1245 nt6.1□□□□□ -1.43
RPN11P43588 AZR1YGR224W 1842 nt6.1□□□□□ -1.43
RPN11P43588 EDC3YEL015W 1656 nt6.1□□□□□ -1.43
RPN11P43588 CTS2YDR371W 1536 nt6.09□□□□□ -1.43
RPN11P43588 SUP56tL(CAA)A 82 nt6.09□□□□□ -1.43
RPN11P43588 SUP53tL(CAA)C 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)DtL(CAA)D 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)G1tL(CAA)G1 82 nt6.09□□□□□ -1.43
RPN11P43588 SUP54tL(CAA)G2 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)G3tL(CAA)G3 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)KtL(CAA)K 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)LtL(CAA)L 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)MtL(CAA)M 82 nt6.09□□□□□ -1.43
RPN11P43588 tL(CAA)NtL(CAA)N 82 nt6.09□□□□□ -1.43
RPN11P43588 FUN19YAL034C 1242 nt6.09□□□□□ -1.43
RPN11P43588 YLR157W-DYLR157W-D 213 nt6.09□□□□□ -1.43
RPN11P43588 SIR2YDL042C 1689 nt6.09□□□□□ -1.43
RPN11P43588 CHS5YLR330W 2016 nt6.08□□□□□ -1.44
RPN11P43588 CBT1YKL208W 816 nt6.08□□□□□ -1.44
RPN11P43588 SCO1YBR037C 888 nt6.08□□□□□ -1.44
RPN11P43588 CMR1YDL156W 1569 nt6.08□□□□□ -1.44
RPN11P43588 FRT2YAL028W 1587 nt6.08□□□□□ -1.44
RPN11P43588 IMA2YOL157C 1770 nt6.08□□□□□ -1.44
RPN11P43588 CLN1YMR199W 1641 nt6.07□□□□□ -1.44
RPN11P43588 DPB2YPR175W 2070 nt6.07□□□□□ -1.44
RPN11P43588 HEM3YDL205C 984 nt6.07□□□□□ -1.44
RPN11P43588 UBC8YEL012W 657 nt6.07□□□□□ -1.44
RPN11P43588 RPL15BYMR121C 615 nt6.07□□□□□ -1.44
RPN11P43588 YOL131WYOL131W 327 nt6.07□□□□□ -1.44
RPN11P43588 ATP4YPL078C 735 nt6.07□□□□□ -1.44
RPN11P43588 LYS2YBR115C 4179 nt6.07□□□□□ -1.44
RPN11P43588 CIA2YHR122W 696 nt6.06□□□□□ -1.44
RPN11P43588 KTI12YKL110C 942 nt6.06□□□□□ -1.44
RPN11P43588 NMA1YLR328W 1206 nt6.06□□□□□ -1.44
RPN11P43588 NMD4YLR363C 657 nt6.06□□□□□ -1.44
RPN11P43588 ECM23YPL021W 564 nt6.06□□□□□ -1.44
RPN11P43588 HRR25YPL204W 1485 nt6.06□□□□□ -1.44
RPN11P43588 TFC6YDR362C 2019 nt6.06□□□□□ -1.44
RPN11P43588 YFL052WYFL052W 1398 nt6.06□□□□□ -1.44
RPN11P43588 YJR124CYJR124C 1347 nt6.05□□□□□ -1.44
RPN11P43588 GEX1YCL073C 1848 nt6.05□□□□□ -1.44
RPN11P43588 GEX2YKR106W 1848 nt6.05□□□□□ -1.44
RPN11P43588 IWR1YDL115C 1062 nt6.05□□□□□ -1.44
RPN11P43588 FPR2YDR519W 408 nt6.05□□□□□ -1.44
RPN11P43588 RPL7AYGL076C 735 nt6.05□□□□□ -1.44
RPN11P43588 YMR147WYMR147W 672 nt6.05□□□□□ -1.44
RPN11P43588 RPL7BYPL198W 735 nt6.05□□□□□ -1.44
RPN11P43588 NOT3YIL038C 2511 nt6.05□□□□□ -1.44
RPN11P43588 BUD7YOR299W 2241 nt6.05□□□□□ -1.44
RPN11P43588 ERD1YDR414C 1089 nt6.04□□□□□ -1.44
RPN11P43588 RPL14AYKL006W 417 nt6.04□□□□□ -1.44
RPN11P43588 ATG14YBR128C 1035 nt6.04□□□□□ -1.44
RPN11P43588 SEC12YNR026C 1416 nt6.04□□□□□ -1.44
RPN11P43588 PDI1YCL043C 1569 nt6.04□□□□□ -1.44
RPN11P43588 SKI2YLR398C 3864 nt6.04□□□□□ -1.44
RPN11P43588 HOS2YGL194C 1359 nt6.04□□□□□ -1.44
RPN11P43588 DRS1YLL008W 2259 nt6.04□□□□□ -1.44
RPN11P43588 APM4YOL062C 1476 nt6.03□□□□□ -1.44
RPN11P43588 APM1YPL259C 1428 nt6.03□□□□□ -1.44
RPN11P43588 GEP5YLR091W 882 nt6.03□□□□□ -1.44
RPN11P43588 AIF1YNR074C 1137 nt6.03□□□□□ -1.44
RPN11P43588 HXT3YDR345C 1704 nt6.02□□□□□ -1.45
RPN11P43588 TRP1YDR007W 675 nt6.02□□□□□ -1.45
RPN11P43588 YLR154W-BYLR154W-B 165 nt6.02□□□□□ -1.45
RPN11P43588 PCL1YNL289W 840 nt6.02□□□□□ -1.45
RPN11P43588 CEF1YMR213W 1773 nt6.02□□□□□ -1.45
RPN11P43588 ECM3YOR092W 1842 nt6.02□□□□□ -1.45
RPN11P43588 RCR2YDR003W 633 nt6.01□□□□□ -1.45
RPN11P43588 GMH1YKR030W 822 nt6.01□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 140.8 ms