Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA4P35542 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SAA4P35542 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.82■□□□□ 0.6
SAA4P35542 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.82■□□□□ 0.6
SAA4P35542 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.82■□□□□ 0.6
SAA4P35542 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.82■□□□□ 0.6
SAA4P35542 AC010997.5-201ENST00000609182 354 ntBASIC18.82■□□□□ 0.6
SAA4P35542 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.82■□□□□ 0.6
SAA4P35542 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA4P35542 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA4P35542 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.81■□□□□ 0.6
SAA4P35542 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA4P35542 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA4P35542 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.81■□□□□ 0.6
SAA4P35542 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.81■□□□□ 0.6
SAA4P35542 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.81■□□□□ 0.6
SAA4P35542 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.81■□□□□ 0.6
SAA4P35542 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SAA4P35542 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.8■□□□□ 0.6
SAA4P35542 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.8■□□□□ 0.6
SAA4P35542 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
SAA4P35542 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.8■□□□□ 0.6
SAA4P35542 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.8■□□□□ 0.6
SAA4P35542 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA4P35542 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SAA4P35542 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAA4P35542 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.79■□□□□ 0.6
SAA4P35542 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA4P35542 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA4P35542 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.79■□□□□ 0.6
SAA4P35542 SNX5-217ENST00000606557 1087 ntBASIC18.79■□□□□ 0.6
SAA4P35542 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.79■□□□□ 0.6
SAA4P35542 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA4P35542 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA4P35542 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SAA4P35542 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SAA4P35542 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA4P35542 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAA4P35542 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.78■□□□□ 0.6
SAA4P35542 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA4P35542 AC022211.4-201ENST00000625094 2161 ntBASIC18.78■□□□□ 0.6
SAA4P35542 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SAA4P35542 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SAA4P35542 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.77■□□□□ 0.6
SAA4P35542 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.77■□□□□ 0.6
SAA4P35542 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SAA4P35542 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SAA4P35542 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAA4P35542 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.77■□□□□ 0.6
SAA4P35542 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SAA4P35542 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAA4P35542 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.77■□□□□ 0.6
SAA4P35542 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SAA4P35542 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.77■□□□□ 0.59
SAA4P35542 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SAA4P35542 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAA4P35542 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SAA4P35542 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.76■□□□□ 0.59
SAA4P35542 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAA4P35542 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SAA4P35542 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA4P35542 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA4P35542 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SAA4P35542 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA4P35542 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA4P35542 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.75■□□□□ 0.59
SAA4P35542 MIR6724-1-201ENST00000616420 92 ntBASIC18.75■□□□□ 0.59
SAA4P35542 MIR6724-2-201ENST00000616483 92 ntBASIC18.75■□□□□ 0.59
SAA4P35542 MIR6724-4-201ENST00000617390 92 ntBASIC18.75■□□□□ 0.59
SAA4P35542 MIR6724-3-201ENST00000622482 92 ntBASIC18.75■□□□□ 0.59
SAA4P35542 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.75■□□□□ 0.59
SAA4P35542 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.75■□□□□ 0.59
SAA4P35542 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.75■□□□□ 0.59
SAA4P35542 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA4P35542 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SAA4P35542 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA4P35542 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SAA4P35542 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA4P35542 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA4P35542 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.74■□□□□ 0.59
SAA4P35542 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.74■□□□□ 0.59
SAA4P35542 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA4P35542 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms