Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 TAH18YPR048W 1872 nt5.92□□□□□ -1.46
MSH1P25846 MPM1YJL066C 759 nt5.92□□□□□ -1.46
MSH1P25846 PPA2YMR267W 933 nt5.92□□□□□ -1.46
MSH1P25846 JNM1YMR294W 1122 nt5.92□□□□□ -1.46
MSH1P25846 UIP4YPL186C 915 nt5.92□□□□□ -1.46
MSH1P25846 OCA5YHL029C 2040 nt5.92□□□□□ -1.46
MSH1P25846 PIF1YML061C 2580 nt5.92□□□□□ -1.46
MSH1P25846 DAK1YML070W 1755 nt5.91□□□□□ -1.46
MSH1P25846 ATE1YGL017W 1512 nt5.91□□□□□ -1.46
MSH1P25846 TAX4YJL083W 1815 nt5.91□□□□□ -1.46
MSH1P25846 IRC7YFR055W 1023 nt5.91□□□□□ -1.46
MSH1P25846 YJL171CYJL171C 1191 nt5.91□□□□□ -1.46
MSH1P25846 HCR1YLR192C 798 nt5.91□□□□□ -1.46
MSH1P25846 TOM40YMR203W 1164 nt5.91□□□□□ -1.46
MSH1P25846 RPS15YOL040C 429 nt5.91□□□□□ -1.46
MSH1P25846 SIP5YMR140W 1470 nt5.9□□□□□ -1.46
MSH1P25846 SED4YCR067C 3198 nt5.9□□□□□ -1.46
MSH1P25846 AAP1YHR047C 2571 nt5.9□□□□□ -1.46
MSH1P25846 ATR1YML116W 1629 nt5.9□□□□□ -1.46
MSH1P25846 SNM1YDR478W 597 nt5.9□□□□□ -1.46
MSH1P25846 CDC43YGL155W 1131 nt5.9□□□□□ -1.46
MSH1P25846 YIR018C-AYIR018C-A 138 nt5.9□□□□□ -1.46
MSH1P25846 APS3YJL024C 585 nt5.9□□□□□ -1.46
MSH1P25846 MTW1YAL034W-A 870 nt5.9□□□□□ -1.46
MSH1P25846 YNL042W-BYNL042W-B 258 nt5.9□□□□□ -1.46
MSH1P25846 YGP1YNL160W 1065 nt5.9□□□□□ -1.46
MSH1P25846 snR10snR10 245 nt5.9□□□□□ -1.46
MSH1P25846 YPL113CYPL113C 1191 nt5.9□□□□□ -1.46
MSH1P25846 HES1YOR237W 1305 nt5.9□□□□□ -1.47
MSH1P25846 MST1YKL194C 1389 nt5.9□□□□□ -1.47
MSH1P25846 RPT1YKL145W 1404 nt5.9□□□□□ -1.47
MSH1P25846 SMF3YLR034C 1422 nt5.9□□□□□ -1.47
MSH1P25846 DPH2YKL191W 1605 nt5.89□□□□□ -1.47
MSH1P25846 CCZ1YBR131W 2115 nt5.89□□□□□ -1.47
MSH1P25846 ERG7YHR072W 2196 nt5.89□□□□□ -1.47
MSH1P25846 YDR396WYDR396W 501 nt5.89□□□□□ -1.47
MSH1P25846 RPL12AYEL054C 498 nt5.89□□□□□ -1.47
MSH1P25846 SPO74YGL170C 1242 nt5.89□□□□□ -1.47
MSH1P25846 MND2YIR025W 1107 nt5.89□□□□□ -1.47
MSH1P25846 SEN34YAR008W 828 nt5.89□□□□□ -1.47
MSH1P25846 CIN4YMR138W 576 nt5.89□□□□□ -1.47
MSH1P25846 DXO1YDR370C 1329 nt5.89□□□□□ -1.47
MSH1P25846 MAD3YJL013C 1548 nt5.89□□□□□ -1.47
MSH1P25846 CTF18YMR078C 2226 nt5.89□□□□□ -1.47
MSH1P25846 MET7YOR241W 1647 nt5.88□□□□□ -1.47
MSH1P25846 DUR1,2YBR208C 5508 nt5.88□□□□□ -1.47
MSH1P25846 RTN1YDR233C 888 nt5.88□□□□□ -1.47
MSH1P25846 PHO86YJL117W 936 nt5.88□□□□□ -1.47
MSH1P25846 YBL029WYBL029W 1131 nt5.88□□□□□ -1.47
MSH1P25846 YOR292CYOR292C 930 nt5.88□□□□□ -1.47
MSH1P25846 YPL102CYPL102C 303 nt5.88□□□□□ -1.47
MSH1P25846 UBA3YPR066W 900 nt5.88□□□□□ -1.47
MSH1P25846 CTR1YPR124W 1221 nt5.88□□□□□ -1.47
MSH1P25846 PRI2YKL045W 1587 nt5.88□□□□□ -1.47
MSH1P25846 NSI1YDR026C 1713 nt5.88□□□□□ -1.47
MSH1P25846 FOL1YNL256W 2475 nt5.87□□□□□ -1.47
MSH1P25846 GCS1YDL226C 1059 nt5.87□□□□□ -1.47
MSH1P25846 LEU5YHR002W 1074 nt5.87□□□□□ -1.47
MSH1P25846 IPI1YHR085W 1005 nt5.87□□□□□ -1.47
MSH1P25846 PEX12YMR026C 1200 nt5.87□□□□□ -1.47
MSH1P25846 YPR109WYPR109W 885 nt5.87□□□□□ -1.47
MSH1P25846 STL1YDR536W 1710 nt5.87□□□□□ -1.47
MSH1P25846 UTP18YJL069C 1785 nt5.87□□□□□ -1.47
MSH1P25846 FLC3YGL139W 2409 nt5.87□□□□□ -1.47
MSH1P25846 SYG1YIL047C 2709 nt5.86□□□□□ -1.47
MSH1P25846 GRS1YBR121C 2004 nt5.86□□□□□ -1.47
MSH1P25846 SAS4YDR181C 1446 nt5.86□□□□□ -1.47
MSH1P25846 PCL9YDL179W 915 nt5.86□□□□□ -1.47
MSH1P25846 DBR1YKL149C 1218 nt5.86□□□□□ -1.47
MSH1P25846 YLL017WYLL017W 312 nt5.86□□□□□ -1.47
MSH1P25846 VTA1YLR181C 993 nt5.86□□□□□ -1.47
MSH1P25846 GTR1YML121W 933 nt5.86□□□□□ -1.47
MSH1P25846 CSG2YBR036C 1233 nt5.86□□□□□ -1.47
MSH1P25846 FAA4YMR246W 2085 nt5.86□□□□□ -1.47
MSH1P25846 COR1YBL045C 1374 nt5.85□□□□□ -1.47
MSH1P25846 MID2YLR332W 1131 nt5.85□□□□□ -1.47
MSH1P25846 MRPS5YBR251W 924 nt5.85□□□□□ -1.47
MSH1P25846 IML2YJL082W 2196 nt5.84□□□□□ -1.47
MSH1P25846 ADE12YNL220W 1302 nt5.84□□□□□ -1.47
MSH1P25846 UBC6YER100W 753 nt5.84□□□□□ -1.47
MSH1P25846 SPC34YKR037C 888 nt5.84□□□□□ -1.47
MSH1P25846 ECM19YLR390W 339 nt5.84□□□□□ -1.47
MSH1P25846 YML101C-AYML101C-A 318 nt5.84□□□□□ -1.47
MSH1P25846 BRF1YGR246C 1791 nt5.84□□□□□ -1.47
MSH1P25846 SPC97YHR172W 2472 nt5.84□□□□□ -1.48
MSH1P25846 APE1YKL103C 1545 nt5.84□□□□□ -1.48
MSH1P25846 YER134CYER134C 537 nt5.83□□□□□ -1.48
MSH1P25846 CTR2YHR175W 570 nt5.83□□□□□ -1.48
MSH1P25846 YLR126CYLR126C 756 nt5.83□□□□□ -1.48
MSH1P25846 YMR030W-AYMR030W-A 291 nt5.83□□□□□ -1.48
MSH1P25846 SPC24YMR117C 642 nt5.83□□□□□ -1.48
MSH1P25846 YOR200WYOR200W 399 nt5.83□□□□□ -1.48
MSH1P25846 UBC11YOR339C 471 nt5.83□□□□□ -1.48
MSH1P25846 MPC54YOR177C 1395 nt5.82□□□□□ -1.48
MSH1P25846 VBA1YMR088C 1689 nt5.82□□□□□ -1.48
MSH1P25846 PDI1YCL043C 1569 nt5.82□□□□□ -1.48
MSH1P25846 snR57snR57 88 nt5.82□□□□□ -1.48
MSH1P25846 ARP10YDR106W 855 nt5.82□□□□□ -1.48
MSH1P25846 MTQ2YDR140W 666 nt5.82□□□□□ -1.48
MSH1P25846 YGR011WYGR011W 327 nt5.82□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms