Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 RPL15BYMR121C 615 nt8.17□□□□□ -1.1
XRN1P22147 NGR1YBR212W 2019 nt8.16□□□□□ -1.1
XRN1P22147 RPA49YNL248C 1248 nt8.16□□□□□ -1.1
XRN1P22147 snR19snR19 568 nt8.16□□□□□ -1.1
XRN1P22147 MTC5YDR128W 3447 nt8.15□□□□□ -1.1
XRN1P22147 MRPL15YLR312W-A 762 nt8.15□□□□□ -1.1
XRN1P22147 CLB2YPR119W 1476 nt8.14□□□□□ -1.11
XRN1P22147 IWR1YDL115C 1062 nt8.14□□□□□ -1.11
XRN1P22147 RGD1YBR260C 2001 nt8.14□□□□□ -1.11
XRN1P22147 YBL070CYBL070C 321 nt8.13□□□□□ -1.11
XRN1P22147 ECM23YPL021W 564 nt8.13□□□□□ -1.11
XRN1P22147 PDR18YNR070W 4002 nt8.12□□□□□ -1.11
XRN1P22147 SPR6YER115C 576 nt8.12□□□□□ -1.11
XRN1P22147 CIN5YOR028C 888 nt8.12□□□□□ -1.11
XRN1P22147 MRM2YGL136C 963 nt8.11□□□□□ -1.11
XRN1P22147 DCS2YOR173W 1062 nt8.11□□□□□ -1.11
XRN1P22147 MAG2YLR427W 2013 nt8.11□□□□□ -1.11
XRN1P22147 THI5YFL058W 1023 nt8.1□□□□□ -1.11
XRN1P22147 NSG2YNL156C 900 nt8.1□□□□□ -1.11
XRN1P22147 THI12YNL332W 1023 nt8.1□□□□□ -1.11
XRN1P22147 ARF2YDL137W 546 nt8.09□□□□□ -1.11
XRN1P22147 HEM3YDL205C 984 nt8.09□□□□□ -1.11
XRN1P22147 CIA2YHR122W 696 nt8.09□□□□□ -1.11
XRN1P22147 YKR041WYKR041W 753 nt8.09□□□□□ -1.11
XRN1P22147 HOR7YMR251W-A 180 nt8.09□□□□□ -1.11
XRN1P22147 CSC1YLR241W 2349 nt8.09□□□□□ -1.11
XRN1P22147 CEG1YGL130W 1380 nt8.09□□□□□ -1.12
XRN1P22147 ISU2YOR226C 471 nt8.08□□□□□ -1.12
XRN1P22147 ELC1YPL046C 300 nt8.08□□□□□ -1.12
XRN1P22147 STE50YCL032W 1041 nt8.08□□□□□ -1.12
XRN1P22147 NOG2YNR053C 1461 nt8.08□□□□□ -1.12
XRN1P22147 YPR169W-AYPR169W-A 219 nt8.08□□□□□ -1.12
XRN1P22147 YPR170W-BYPR170W-B 258 nt8.08□□□□□ -1.12
XRN1P22147 BUD9YGR041W 1644 nt8.08□□□□□ -1.12
XRN1P22147 HPF1YOL155C 2904 nt8.07□□□□□ -1.12
XRN1P22147 PDC1YLR044C 1692 nt8.07□□□□□ -1.12
XRN1P22147 CTS1YLR286C 1689 nt8.07□□□□□ -1.12
XRN1P22147 KTR5YNL029C 1569 nt8.07□□□□□ -1.12
XRN1P22147 SSH4YKL124W 1740 nt8.06□□□□□ -1.12
XRN1P22147 ESC8YOL017W 2145 nt8.06□□□□□ -1.12
XRN1P22147 ZUO1YGR285C 1302 nt8.06□□□□□ -1.12
XRN1P22147 FAP1YNL023C 2898 nt8.06□□□□□ -1.12
XRN1P22147 YGL088WYGL088W 366 nt8.06□□□□□ -1.12
XRN1P22147 tL(UAG)JtL(UAG)J 82 nt8.06□□□□□ -1.12
XRN1P22147 tL(UAG)L1tL(UAG)L1 82 nt8.06□□□□□ -1.12
XRN1P22147 tL(UAG)L2tL(UAG)L2 82 nt8.06□□□□□ -1.12
XRN1P22147 MRI1YPR118W 1236 nt8.06□□□□□ -1.12
XRN1P22147 RAT1YOR048C 3021 nt8.06□□□□□ -1.12
XRN1P22147 FOX2YKR009C 2703 nt8.05□□□□□ -1.12
XRN1P22147 RPT2YDL007W 1314 nt8.05□□□□□ -1.12
XRN1P22147 EXO70YJL085W 1872 nt8.05□□□□□ -1.12
XRN1P22147 GRS1YBR121C 2004 nt8.04□□□□□ -1.12
XRN1P22147 AIF1YNR074C 1137 nt8.04□□□□□ -1.12
XRN1P22147 SAC6YDR129C 1929 nt8.04□□□□□ -1.12
XRN1P22147 MPM1YJL066C 759 nt8.03□□□□□ -1.12
XRN1P22147 POP3YNL282W 588 nt8.03□□□□□ -1.12
XRN1P22147 ALD3YMR169C 1521 nt8.03□□□□□ -1.12
XRN1P22147 ALD2YMR170C 1521 nt8.03□□□□□ -1.12
XRN1P22147 HIR2YOR038C 2628 nt8.03□□□□□ -1.12
XRN1P22147 FRT2YAL028W 1587 nt8.03□□□□□ -1.12
XRN1P22147 HMS2YJR147W 1077 nt8.03□□□□□ -1.12
XRN1P22147 ATR1YML116W 1629 nt8.02□□□□□ -1.13
XRN1P22147 RFU1YLR073C 603 nt8.02□□□□□ -1.13
XRN1P22147 SAP30YMR263W 606 nt8.02□□□□□ -1.13
XRN1P22147 AMA1YGR225W 1782 nt8.02□□□□□ -1.13
XRN1P22147 GMC1YDR506C 1827 nt8.01□□□□□ -1.13
XRN1P22147 PTK2YJR059W 2457 nt8.01□□□□□ -1.13
XRN1P22147 NMD4YLR363C 657 nt8.01□□□□□ -1.13
XRN1P22147 UMP1YBR173C 447 nt8.01□□□□□ -1.13
XRN1P22147 RFC2YJR068W 1062 nt8□□□□□ -1.13
XRN1P22147 XPT1YJR133W 630 nt8□□□□□ -1.13
XRN1P22147 MTW1YAL034W-A 870 nt8□□□□□ -1.13
XRN1P22147 NOP58YOR310C 1536 nt8□□□□□ -1.13
XRN1P22147 ADE3YGR204W 2841 nt8□□□□□ -1.13
XRN1P22147 FUM1YPL262W 1467 nt7.99□□□□□ -1.13
XRN1P22147 UBC8YEL012W 657 nt7.99□□□□□ -1.13
XRN1P22147 ETT1YOR051C 1239 nt7.99□□□□□ -1.13
XRN1P22147 AIR2YDL175C 1035 nt7.98□□□□□ -1.13
XRN1P22147 YAR019W-AYAR019W-A 333 nt7.98□□□□□ -1.13
XRN1P22147 YJL107CYJL107C 1164 nt7.98□□□□□ -1.13
XRN1P22147 NPT1YOR209C 1290 nt7.97□□□□□ -1.13
XRN1P22147 TIP41YPR040W 1071 nt7.97□□□□□ -1.13
XRN1P22147 YGP1YNL160W 1065 nt7.96□□□□□ -1.14
XRN1P22147 YJR124CYJR124C 1347 nt7.96□□□□□ -1.14
XRN1P22147 IMA2YOL157C 1770 nt7.95□□□□□ -1.14
XRN1P22147 SUP56tL(CAA)A 82 nt7.95□□□□□ -1.14
XRN1P22147 SUP53tL(CAA)C 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)DtL(CAA)D 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)G1tL(CAA)G1 82 nt7.95□□□□□ -1.14
XRN1P22147 SUP54tL(CAA)G2 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)G3tL(CAA)G3 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)KtL(CAA)K 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)LtL(CAA)L 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)MtL(CAA)M 82 nt7.95□□□□□ -1.14
XRN1P22147 tL(CAA)NtL(CAA)N 82 nt7.95□□□□□ -1.14
XRN1P22147 YNL181WYNL181W 1224 nt7.95□□□□□ -1.14
XRN1P22147 YPL278CYPL278C 303 nt7.95□□□□□ -1.14
XRN1P22147 SDA1YGR245C 2304 nt7.94□□□□□ -1.14
XRN1P22147 YDL012CYDL012C 324 nt7.93□□□□□ -1.14
XRN1P22147 SLZ1YNL196C 897 nt7.93□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms