Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.96■■■□□ 2.23
KCNA3P22001 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.96■■■□□ 2.23
KCNA3P22001 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.96■■■□□ 2.23
KCNA3P22001 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
KCNA3P22001 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.95■■■□□ 2.22
KCNA3P22001 AC099791.1-201ENST00000416440 715 ntBASIC28.95■■■□□ 2.22
KCNA3P22001 AC092171.4-201ENST00000609130 632 ntBASIC28.95■■■□□ 2.22
KCNA3P22001 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.95■■■□□ 2.22
KCNA3P22001 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
KCNA3P22001 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
KCNA3P22001 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.94■■■□□ 2.22
KCNA3P22001 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
KCNA3P22001 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.94■■■□□ 2.22
KCNA3P22001 AC092437.1-201ENST00000624794 1048 ntBASIC28.94■■■□□ 2.22
KCNA3P22001 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
KCNA3P22001 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.94■■■□□ 2.22
KCNA3P22001 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.94■■■□□ 2.22
KCNA3P22001 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
KCNA3P22001 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.93■■■□□ 2.22
KCNA3P22001 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNA3P22001 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
KCNA3P22001 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
KCNA3P22001 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.92■■■□□ 2.22
KCNA3P22001 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
KCNA3P22001 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.92■■■□□ 2.22
KCNA3P22001 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.92■■■□□ 2.22
KCNA3P22001 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.92■■■□□ 2.22
KCNA3P22001 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.92■■■□□ 2.22
KCNA3P22001 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
KCNA3P22001 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
KCNA3P22001 AC005703.6-201ENST00000623265 1329 ntBASIC28.92■■■□□ 2.22
KCNA3P22001 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
KCNA3P22001 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.91■■■□□ 2.22
KCNA3P22001 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.91■■■□□ 2.22
KCNA3P22001 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
KCNA3P22001 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
KCNA3P22001 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.91■■■□□ 2.22
KCNA3P22001 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
KCNA3P22001 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.91■■■□□ 2.22
KCNA3P22001 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.91■■■□□ 2.22
KCNA3P22001 AC099791.2-201ENST00000605725 427 ntBASIC28.91■■■□□ 2.22
KCNA3P22001 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.91■■■□□ 2.22
KCNA3P22001 AC011298.3-201ENST00000615796 283 ntBASIC28.91■■■□□ 2.22
KCNA3P22001 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.9■■■□□ 2.22
KCNA3P22001 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.9■■■□□ 2.22
KCNA3P22001 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
KCNA3P22001 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
KCNA3P22001 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
KCNA3P22001 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.9■■■□□ 2.22
KCNA3P22001 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.9■■■□□ 2.22
KCNA3P22001 AL137784.2-201ENST00000607332 1000 ntBASIC28.9■■■□□ 2.22
KCNA3P22001 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
KCNA3P22001 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.9■■■□□ 2.22
KCNA3P22001 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
KCNA3P22001 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
KCNA3P22001 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.89■■■□□ 2.22
KCNA3P22001 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.89■■■□□ 2.22
KCNA3P22001 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.89■■■□□ 2.22
KCNA3P22001 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
KCNA3P22001 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.88■■■□□ 2.21
KCNA3P22001 AL138724.1-201ENST00000606771 1088 ntBASIC28.88■■■□□ 2.21
KCNA3P22001 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.88■■■□□ 2.21
KCNA3P22001 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
KCNA3P22001 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNA3P22001 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNA3P22001 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNA3P22001 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
KCNA3P22001 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.87■■■□□ 2.21
KCNA3P22001 KRT18P5-201ENST00000436075 1291 ntBASIC28.87■■■□□ 2.21
KCNA3P22001 AC034268.1-201ENST00000441047 882 ntBASIC28.87■■■□□ 2.21
KCNA3P22001 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.87■■■□□ 2.21
KCNA3P22001 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNA3P22001 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNA3P22001 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
KCNA3P22001 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.86■■■□□ 2.21
KCNA3P22001 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.86■■■□□ 2.21
KCNA3P22001 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
KCNA3P22001 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.85■■■□□ 2.21
KCNA3P22001 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
KCNA3P22001 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
KCNA3P22001 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
KCNA3P22001 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
KCNA3P22001 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.84■■■□□ 2.21
KCNA3P22001 AL031602.1-201ENST00000633169 911 ntBASIC28.84■■■□□ 2.21
KCNA3P22001 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
KCNA3P22001 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
KCNA3P22001 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
KCNA3P22001 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
KCNA3P22001 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
KCNA3P22001 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
KCNA3P22001 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.83■■■□□ 2.21
KCNA3P22001 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
KCNA3P22001 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
KCNA3P22001 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms