Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
ZNF728P0DKX0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF728P0DKX0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF728P0DKX0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF728P0DKX0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF728P0DKX0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF728P0DKX0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF728P0DKX0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF728P0DKX0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 RPS2P7-201ENST00000447334 885 ntBASIC19.62■□□□□ 0.73
ZNF728P0DKX0 AC012354.3-201ENST00000623734 483 ntBASIC19.62■□□□□ 0.73
ZNF728P0DKX0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 AC068473.5-201ENST00000616428 2072 ntBASIC19.62■□□□□ 0.73
ZNF728P0DKX0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF728P0DKX0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 AC004987.1-201ENST00000428627 508 ntBASIC19.61■□□□□ 0.73
ZNF728P0DKX0 ATP5G2P3-201ENST00000429083 425 ntBASIC19.61■□□□□ 0.73
ZNF728P0DKX0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF728P0DKX0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 DUX4L18-201ENST00000553347 1267 ntBASIC19.6■□□□□ 0.73
ZNF728P0DKX0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF728P0DKX0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 TSPY13P-201ENST00000338964 914 ntBASIC19.59■□□□□ 0.73
ZNF728P0DKX0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.59■□□□□ 0.73
ZNF728P0DKX0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF728P0DKX0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF728P0DKX0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF728P0DKX0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF728P0DKX0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF728P0DKX0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF728P0DKX0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 AC087393.1-201ENST00000582896 145 ntBASIC19.58■□□□□ 0.72
ZNF728P0DKX0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF728P0DKX0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms