Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YGL152CYGL152C 678 nt4.89□□□□□ -1.63
RPL40BP0CH09 PRS1YKL181W 1284 nt4.89□□□□□ -1.63
RPL40BP0CH09 PGA2YNL149C 390 nt4.89□□□□□ -1.63
RPL40BP0CH09 NPT1YOR209C 1290 nt4.89□□□□□ -1.63
RPL40BP0CH09 MLC2YPR188C 492 nt4.89□□□□□ -1.63
RPL40BP0CH09 PDH1YPR002W 1551 nt4.89□□□□□ -1.63
RPL40BP0CH09 MAL11YGR289C 1851 nt4.88□□□□□ -1.63
RPL40BP0CH09 TRP1YDR007W 675 nt4.88□□□□□ -1.63
RPL40BP0CH09 SUT1YGL162W 900 nt4.88□□□□□ -1.63
RPL40BP0CH09 DBR1YKL149C 1218 nt4.88□□□□□ -1.63
RPL40BP0CH09 YPR195CYPR195C 330 nt4.88□□□□□ -1.63
RPL40BP0CH09 MCH4YOL119C 1506 nt4.87□□□□□ -1.63
RPL40BP0CH09 RCR2YDR003W 633 nt4.87□□□□□ -1.63
RPL40BP0CH09 YNK1YKL067W 462 nt4.87□□□□□ -1.63
RPL40BP0CH09 YNL181WYNL181W 1224 nt4.87□□□□□ -1.63
RPL40BP0CH09 REI1YBR267W 1182 nt4.87□□□□□ -1.63
RPL40BP0CH09 GLC3YEL011W 2115 nt4.87□□□□□ -1.63
RPL40BP0CH09 NRD1YNL251C 1728 nt4.86□□□□□ -1.63
RPL40BP0CH09 MRPL39YML009C 213 nt4.86□□□□□ -1.63
RPL40BP0CH09 UBC4YBR082C 447 nt4.86□□□□□ -1.63
RPL40BP0CH09 RPT4YOR259C 1314 nt4.86□□□□□ -1.63
RPL40BP0CH09 MKS1YNL076W 1755 nt4.86□□□□□ -1.63
RPL40BP0CH09 MPH2YDL247W 1830 nt4.86□□□□□ -1.63
RPL40BP0CH09 BGL2YGR282C 942 nt4.85□□□□□ -1.63
RPL40BP0CH09 RFU1YLR073C 603 nt4.85□□□□□ -1.63
RPL40BP0CH09 YIF1YNL263C 945 nt4.85□□□□□ -1.63
RPL40BP0CH09 OXP1YKL215C 3861 nt4.85□□□□□ -1.63
RPL40BP0CH09 SER33YIL074C 1410 nt4.85□□□□□ -1.63
RPL40BP0CH09 CRZ1YNL027W 2037 nt4.84□□□□□ -1.63
RPL40BP0CH09 tL(UAG)JtL(UAG)J 82 nt4.84□□□□□ -1.63
RPL40BP0CH09 tL(UAG)L1tL(UAG)L1 82 nt4.84□□□□□ -1.63
RPL40BP0CH09 tL(UAG)L2tL(UAG)L2 82 nt4.84□□□□□ -1.63
RPL40BP0CH09 SSZ1YHR064C 1617 nt4.83□□□□□ -1.64
RPL40BP0CH09 APJ1YNL077W 1587 nt4.83□□□□□ -1.64
RPL40BP0CH09 YDL027CYDL027C 1263 nt4.83□□□□□ -1.64
RPL40BP0CH09 DOA1YKL213C 2148 nt4.82□□□□□ -1.64
RPL40BP0CH09 APM2YHL019C 1818 nt4.82□□□□□ -1.64
RPL40BP0CH09 GLO2YDR272W 825 nt4.82□□□□□ -1.64
RPL40BP0CH09 MRPL15YLR312W-A 762 nt4.82□□□□□ -1.64
RPL40BP0CH09 YBL070CYBL070C 321 nt4.82□□□□□ -1.64
RPL40BP0CH09 UBA3YPR066W 900 nt4.82□□□□□ -1.64
RPL40BP0CH09 SPN1YPR133C 1233 nt4.82□□□□□ -1.64
RPL40BP0CH09 FRE3YOR381W 2136 nt4.82□□□□□ -1.64
RPL40BP0CH09 YEH2YLR020C 1617 nt4.82□□□□□ -1.64
RPL40BP0CH09 SIP5YMR140W 1470 nt4.81□□□□□ -1.64
RPL40BP0CH09 COQ6YGR255C 1440 nt4.81□□□□□ -1.64
RPL40BP0CH09 SUB2YDL084W 1341 nt4.81□□□□□ -1.64
RPL40BP0CH09 SUP56tL(CAA)A 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 SUP53tL(CAA)C 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)DtL(CAA)D 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)G1tL(CAA)G1 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 SUP54tL(CAA)G2 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)G3tL(CAA)G3 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)KtL(CAA)K 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)LtL(CAA)L 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)MtL(CAA)M 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 tL(CAA)NtL(CAA)N 82 nt4.81□□□□□ -1.64
RPL40BP0CH09 YPT32YGL210W 669 nt4.81□□□□□ -1.64
RPL40BP0CH09 NQM1YGR043C 1002 nt4.81□□□□□ -1.64
RPL40BP0CH09 PUS6YGR169C 1215 nt4.81□□□□□ -1.64
RPL40BP0CH09 SPG4YMR107W 348 nt4.81□□□□□ -1.64
RPL40BP0CH09 Q0010Q0010 387 nt4.81□□□□□ -1.64
RPL40BP0CH09 PPR1YLR014C 2715 nt4.81□□□□□ -1.64
RPL40BP0CH09 BAP2YBR068C 1830 nt4.81□□□□□ -1.64
RPL40BP0CH09 SSY5YJL156C 2100 nt4.81□□□□□ -1.64
RPL40BP0CH09 HXT17YNR072W 1695 nt4.8□□□□□ -1.64
RPL40BP0CH09 BUD9YGR041W 1644 nt4.8□□□□□ -1.64
RPL40BP0CH09 HAP1YLR256W 4509 nt4.8□□□□□ -1.64
RPL40BP0CH09 CDC43YGL155W 1131 nt4.8□□□□□ -1.64
RPL40BP0CH09 YAR023CYAR023C 540 nt4.8□□□□□ -1.64
RPL40BP0CH09 YLR364C-AYLR364C-A 123 nt4.8□□□□□ -1.64
RPL40BP0CH09 BUD16YEL029C 939 nt4.79□□□□□ -1.64
RPL40BP0CH09 ACP1YKL192C 378 nt4.79□□□□□ -1.64
RPL40BP0CH09 RNR3YIL066C 2610 nt4.79□□□□□ -1.64
RPL40BP0CH09 BSC5YNR069C 1470 nt4.79□□□□□ -1.64
RPL40BP0CH09 HFI1YPL254W 1467 nt4.79□□□□□ -1.64
RPL40BP0CH09 ERG4YGL012W 1422 nt4.79□□□□□ -1.64
RPL40BP0CH09 UTP18YJL069C 1785 nt4.78□□□□□ -1.64
RPL40BP0CH09 HXT3YDR345C 1704 nt4.78□□□□□ -1.64
RPL40BP0CH09 NSE5YML023C 1671 nt4.78□□□□□ -1.64
RPL40BP0CH09 YGL063C-AYGL063C-A 150 nt4.78□□□□□ -1.64
RPL40BP0CH09 YNG2YHR090C 849 nt4.78□□□□□ -1.64
RPL40BP0CH09 YHR140WYHR140W 720 nt4.78□□□□□ -1.64
RPL40BP0CH09 CTR2YHR175W 570 nt4.78□□□□□ -1.64
RPL40BP0CH09 SMF3YLR034C 1422 nt4.78□□□□□ -1.64
RPL40BP0CH09 STL1YDR536W 1710 nt4.77□□□□□ -1.65
RPL40BP0CH09 ATE1YGL017W 1512 nt4.77□□□□□ -1.65
RPL40BP0CH09 RRN3YKL125W 1884 nt4.77□□□□□ -1.65
RPL40BP0CH09 PCS60YBR222C 1632 nt4.77□□□□□ -1.65
RPL40BP0CH09 YNL134CYNL134C 1131 nt4.77□□□□□ -1.65
RPL40BP0CH09 UTP7YER082C 1665 nt4.77□□□□□ -1.65
RPL40BP0CH09 YEF1YEL041W 1488 nt4.76□□□□□ -1.65
RPL40BP0CH09 TEL2YGR099W 2067 nt4.76□□□□□ -1.65
RPL40BP0CH09 LUC7YDL087C 786 nt4.76□□□□□ -1.65
RPL40BP0CH09 URE2YNL229C 1065 nt4.76□□□□□ -1.65
RPL40BP0CH09 GSP2YOR185C 663 nt4.76□□□□□ -1.65
RPL40BP0CH09 PIF1YML061C 2580 nt4.76□□□□□ -1.65
RPL40BP0CH09 DBF4YDR052C 2115 nt4.76□□□□□ -1.65
RPL40BP0CH09 LYP1YNL268W 1836 nt4.76□□□□□ -1.65
RPL40BP0CH09 DED81YHR019C 1665 nt4.76□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms