Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 YGL152CYGL152C 678 nt4.89□□□□□ -1.63
RPL40AP0CH08 PRS1YKL181W 1284 nt4.89□□□□□ -1.63
RPL40AP0CH08 PGA2YNL149C 390 nt4.89□□□□□ -1.63
RPL40AP0CH08 NPT1YOR209C 1290 nt4.89□□□□□ -1.63
RPL40AP0CH08 MLC2YPR188C 492 nt4.89□□□□□ -1.63
RPL40AP0CH08 PDH1YPR002W 1551 nt4.89□□□□□ -1.63
RPL40AP0CH08 MAL11YGR289C 1851 nt4.88□□□□□ -1.63
RPL40AP0CH08 TRP1YDR007W 675 nt4.88□□□□□ -1.63
RPL40AP0CH08 SUT1YGL162W 900 nt4.88□□□□□ -1.63
RPL40AP0CH08 DBR1YKL149C 1218 nt4.88□□□□□ -1.63
RPL40AP0CH08 YPR195CYPR195C 330 nt4.88□□□□□ -1.63
RPL40AP0CH08 MCH4YOL119C 1506 nt4.87□□□□□ -1.63
RPL40AP0CH08 RCR2YDR003W 633 nt4.87□□□□□ -1.63
RPL40AP0CH08 YNK1YKL067W 462 nt4.87□□□□□ -1.63
RPL40AP0CH08 YNL181WYNL181W 1224 nt4.87□□□□□ -1.63
RPL40AP0CH08 REI1YBR267W 1182 nt4.87□□□□□ -1.63
RPL40AP0CH08 GLC3YEL011W 2115 nt4.87□□□□□ -1.63
RPL40AP0CH08 NRD1YNL251C 1728 nt4.86□□□□□ -1.63
RPL40AP0CH08 MRPL39YML009C 213 nt4.86□□□□□ -1.63
RPL40AP0CH08 UBC4YBR082C 447 nt4.86□□□□□ -1.63
RPL40AP0CH08 RPT4YOR259C 1314 nt4.86□□□□□ -1.63
RPL40AP0CH08 MKS1YNL076W 1755 nt4.86□□□□□ -1.63
RPL40AP0CH08 MPH2YDL247W 1830 nt4.86□□□□□ -1.63
RPL40AP0CH08 BGL2YGR282C 942 nt4.85□□□□□ -1.63
RPL40AP0CH08 RFU1YLR073C 603 nt4.85□□□□□ -1.63
RPL40AP0CH08 YIF1YNL263C 945 nt4.85□□□□□ -1.63
RPL40AP0CH08 OXP1YKL215C 3861 nt4.85□□□□□ -1.63
RPL40AP0CH08 SER33YIL074C 1410 nt4.85□□□□□ -1.63
RPL40AP0CH08 CRZ1YNL027W 2037 nt4.84□□□□□ -1.63
RPL40AP0CH08 tL(UAG)JtL(UAG)J 82 nt4.84□□□□□ -1.63
RPL40AP0CH08 tL(UAG)L1tL(UAG)L1 82 nt4.84□□□□□ -1.63
RPL40AP0CH08 tL(UAG)L2tL(UAG)L2 82 nt4.84□□□□□ -1.63
RPL40AP0CH08 SSZ1YHR064C 1617 nt4.83□□□□□ -1.64
RPL40AP0CH08 APJ1YNL077W 1587 nt4.83□□□□□ -1.64
RPL40AP0CH08 YDL027CYDL027C 1263 nt4.83□□□□□ -1.64
RPL40AP0CH08 DOA1YKL213C 2148 nt4.82□□□□□ -1.64
RPL40AP0CH08 APM2YHL019C 1818 nt4.82□□□□□ -1.64
RPL40AP0CH08 GLO2YDR272W 825 nt4.82□□□□□ -1.64
RPL40AP0CH08 MRPL15YLR312W-A 762 nt4.82□□□□□ -1.64
RPL40AP0CH08 YBL070CYBL070C 321 nt4.82□□□□□ -1.64
RPL40AP0CH08 UBA3YPR066W 900 nt4.82□□□□□ -1.64
RPL40AP0CH08 SPN1YPR133C 1233 nt4.82□□□□□ -1.64
RPL40AP0CH08 FRE3YOR381W 2136 nt4.82□□□□□ -1.64
RPL40AP0CH08 YEH2YLR020C 1617 nt4.82□□□□□ -1.64
RPL40AP0CH08 SIP5YMR140W 1470 nt4.81□□□□□ -1.64
RPL40AP0CH08 COQ6YGR255C 1440 nt4.81□□□□□ -1.64
RPL40AP0CH08 SUB2YDL084W 1341 nt4.81□□□□□ -1.64
RPL40AP0CH08 SUP56tL(CAA)A 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 SUP53tL(CAA)C 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)DtL(CAA)D 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)G1tL(CAA)G1 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 SUP54tL(CAA)G2 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)G3tL(CAA)G3 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)KtL(CAA)K 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)LtL(CAA)L 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)MtL(CAA)M 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 tL(CAA)NtL(CAA)N 82 nt4.81□□□□□ -1.64
RPL40AP0CH08 YPT32YGL210W 669 nt4.81□□□□□ -1.64
RPL40AP0CH08 NQM1YGR043C 1002 nt4.81□□□□□ -1.64
RPL40AP0CH08 PUS6YGR169C 1215 nt4.81□□□□□ -1.64
RPL40AP0CH08 SPG4YMR107W 348 nt4.81□□□□□ -1.64
RPL40AP0CH08 Q0010Q0010 387 nt4.81□□□□□ -1.64
RPL40AP0CH08 PPR1YLR014C 2715 nt4.81□□□□□ -1.64
RPL40AP0CH08 BAP2YBR068C 1830 nt4.81□□□□□ -1.64
RPL40AP0CH08 SSY5YJL156C 2100 nt4.81□□□□□ -1.64
RPL40AP0CH08 HXT17YNR072W 1695 nt4.8□□□□□ -1.64
RPL40AP0CH08 BUD9YGR041W 1644 nt4.8□□□□□ -1.64
RPL40AP0CH08 HAP1YLR256W 4509 nt4.8□□□□□ -1.64
RPL40AP0CH08 CDC43YGL155W 1131 nt4.8□□□□□ -1.64
RPL40AP0CH08 YAR023CYAR023C 540 nt4.8□□□□□ -1.64
RPL40AP0CH08 YLR364C-AYLR364C-A 123 nt4.8□□□□□ -1.64
RPL40AP0CH08 BUD16YEL029C 939 nt4.79□□□□□ -1.64
RPL40AP0CH08 ACP1YKL192C 378 nt4.79□□□□□ -1.64
RPL40AP0CH08 RNR3YIL066C 2610 nt4.79□□□□□ -1.64
RPL40AP0CH08 BSC5YNR069C 1470 nt4.79□□□□□ -1.64
RPL40AP0CH08 HFI1YPL254W 1467 nt4.79□□□□□ -1.64
RPL40AP0CH08 ERG4YGL012W 1422 nt4.79□□□□□ -1.64
RPL40AP0CH08 UTP18YJL069C 1785 nt4.78□□□□□ -1.64
RPL40AP0CH08 HXT3YDR345C 1704 nt4.78□□□□□ -1.64
RPL40AP0CH08 NSE5YML023C 1671 nt4.78□□□□□ -1.64
RPL40AP0CH08 YGL063C-AYGL063C-A 150 nt4.78□□□□□ -1.64
RPL40AP0CH08 YNG2YHR090C 849 nt4.78□□□□□ -1.64
RPL40AP0CH08 YHR140WYHR140W 720 nt4.78□□□□□ -1.64
RPL40AP0CH08 CTR2YHR175W 570 nt4.78□□□□□ -1.64
RPL40AP0CH08 SMF3YLR034C 1422 nt4.78□□□□□ -1.64
RPL40AP0CH08 STL1YDR536W 1710 nt4.77□□□□□ -1.65
RPL40AP0CH08 ATE1YGL017W 1512 nt4.77□□□□□ -1.65
RPL40AP0CH08 RRN3YKL125W 1884 nt4.77□□□□□ -1.65
RPL40AP0CH08 PCS60YBR222C 1632 nt4.77□□□□□ -1.65
RPL40AP0CH08 YNL134CYNL134C 1131 nt4.77□□□□□ -1.65
RPL40AP0CH08 UTP7YER082C 1665 nt4.77□□□□□ -1.65
RPL40AP0CH08 YEF1YEL041W 1488 nt4.76□□□□□ -1.65
RPL40AP0CH08 TEL2YGR099W 2067 nt4.76□□□□□ -1.65
RPL40AP0CH08 LUC7YDL087C 786 nt4.76□□□□□ -1.65
RPL40AP0CH08 URE2YNL229C 1065 nt4.76□□□□□ -1.65
RPL40AP0CH08 GSP2YOR185C 663 nt4.76□□□□□ -1.65
RPL40AP0CH08 PIF1YML061C 2580 nt4.76□□□□□ -1.65
RPL40AP0CH08 DBF4YDR052C 2115 nt4.76□□□□□ -1.65
RPL40AP0CH08 LYP1YNL268W 1836 nt4.76□□□□□ -1.65
RPL40AP0CH08 DED81YHR019C 1665 nt4.76□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 35.1 ms