Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC004448.1-201ENST00000458332 883 ntBASIC26.53■■□□□ 1.84
HOXC6P09630 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
HOXC6P09630 AC092666.2-201ENST00000613287 246 ntBASIC26.53■■□□□ 1.84
HOXC6P09630 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.53■■□□□ 1.84
HOXC6P09630 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.53■■□□□ 1.84
HOXC6P09630 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
HOXC6P09630 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HOXC6P09630 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HOXC6P09630 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HOXC6P09630 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HOXC6P09630 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.52■■□□□ 1.84
HOXC6P09630 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
HOXC6P09630 AC097639.1-201ENST00000565519 1891 ntBASIC26.52■■□□□ 1.84
HOXC6P09630 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
HOXC6P09630 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
HOXC6P09630 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
HOXC6P09630 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
HOXC6P09630 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
HOXC6P09630 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.51■■□□□ 1.83
HOXC6P09630 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.51■■□□□ 1.83
HOXC6P09630 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
HOXC6P09630 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HOXC6P09630 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.51■■□□□ 1.83
HOXC6P09630 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
HOXC6P09630 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
HOXC6P09630 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
HOXC6P09630 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HOXC6P09630 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.5■■□□□ 1.83
HOXC6P09630 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.5■■□□□ 1.83
HOXC6P09630 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HOXC6P09630 AC096887.2-201ENST00000623443 1957 ntBASIC26.49■■□□□ 1.83
HOXC6P09630 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
HOXC6P09630 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
HOXC6P09630 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
HOXC6P09630 AL136967.2-201ENST00000623968 743 ntBASIC26.49■■□□□ 1.83
HOXC6P09630 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
HOXC6P09630 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HOXC6P09630 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.48■■□□□ 1.83
HOXC6P09630 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
HOXC6P09630 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HOXC6P09630 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HOXC6P09630 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HOXC6P09630 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HOXC6P09630 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.47■■□□□ 1.83
HOXC6P09630 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HOXC6P09630 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HOXC6P09630 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
HOXC6P09630 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HOXC6P09630 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.46■■□□□ 1.83
HOXC6P09630 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
HOXC6P09630 DUX4L19-201ENST00000557448 1267 ntBASIC26.46■■□□□ 1.83
HOXC6P09630 MIR5787-201ENST00000611784 55 ntBASIC26.46■■□□□ 1.83
HOXC6P09630 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.46■■□□□ 1.83
HOXC6P09630 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
HOXC6P09630 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HOXC6P09630 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.46■■□□□ 1.83
HOXC6P09630 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.46■■□□□ 1.83
HOXC6P09630 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
HOXC6P09630 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.46■■□□□ 1.83
HOXC6P09630 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
HOXC6P09630 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
HOXC6P09630 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HOXC6P09630 MIR939-201ENST00000401314 82 ntBASIC26.45■■□□□ 1.82
HOXC6P09630 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.45■■□□□ 1.82
HOXC6P09630 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.45■■□□□ 1.82
HOXC6P09630 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
HOXC6P09630 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HOXC6P09630 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
HOXC6P09630 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
HOXC6P09630 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
HOXC6P09630 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.44■■□□□ 1.82
HOXC6P09630 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HOXC6P09630 AC105265.2-201ENST00000467189 838 ntBASIC26.44■■□□□ 1.82
HOXC6P09630 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HOXC6P09630 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HOXC6P09630 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HOXC6P09630 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HOXC6P09630 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HOXC6P09630 AF213884.3-201ENST00000563833 479 ntBASIC26.43■■□□□ 1.82
HOXC6P09630 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.43■■□□□ 1.82
HOXC6P09630 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
HOXC6P09630 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
HOXC6P09630 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HOXC6P09630 AC005703.6-201ENST00000623265 1329 ntBASIC26.42■■□□□ 1.82
HOXC6P09630 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HOXC6P09630 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.42■■□□□ 1.82
HOXC6P09630 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
HOXC6P09630 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.42■■□□□ 1.82
HOXC6P09630 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.42■■□□□ 1.82
HOXC6P09630 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.42■■□□□ 1.82
HOXC6P09630 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
HOXC6P09630 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HOXC6P09630 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
HOXC6P09630 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.41■■□□□ 1.82
HOXC6P09630 AP001330.3-201ENST00000520123 633 ntBASIC26.41■■□□□ 1.82
HOXC6P09630 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
HOXC6P09630 AC104564.3-201ENST00000582367 638 ntBASIC26.41■■□□□ 1.82
HOXC6P09630 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.41■■□□□ 1.82
HOXC6P09630 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HOXC6P09630 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms