Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.57
RB1P06400 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RB1P06400 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RB1P06400 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RB1P06400 AC097381.1-201ENST00000429019 1296 ntBASIC24.88■■□□□ 1.57
RB1P06400 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.88■■□□□ 1.57
RB1P06400 SYT6-210ENST00000641643 1587 ntBASIC24.88■■□□□ 1.57
RB1P06400 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.88■■□□□ 1.57
RB1P06400 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RB1P06400 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RB1P06400 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
RB1P06400 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.86■■□□□ 1.57
RB1P06400 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.86■■□□□ 1.57
RB1P06400 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.86■■□□□ 1.57
RB1P06400 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.86■■□□□ 1.57
RB1P06400 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RB1P06400 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
RB1P06400 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
RB1P06400 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.84■■□□□ 1.57
RB1P06400 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RB1P06400 AC097639.1-201ENST00000565519 1891 ntBASIC24.83■■□□□ 1.57
RB1P06400 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RB1P06400 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RB1P06400 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RB1P06400 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RB1P06400 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RB1P06400 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.82■■□□□ 1.56
RB1P06400 RASA4CP-201ENST00000424092 1398 ntBASIC24.82■■□□□ 1.56
RB1P06400 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RB1P06400 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RB1P06400 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.82■■□□□ 1.56
RB1P06400 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.82■■□□□ 1.56
RB1P06400 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
RB1P06400 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RB1P06400 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.81■■□□□ 1.56
RB1P06400 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RB1P06400 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.81■■□□□ 1.56
RB1P06400 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.81■■□□□ 1.56
RB1P06400 MIR4767-201ENST00000582827 78 ntBASIC24.81■■□□□ 1.56
RB1P06400 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RB1P06400 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RB1P06400 CA15P2-201ENST00000611168 834 ntBASIC24.8■■□□□ 1.56
RB1P06400 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RB1P06400 AC142086.6-201ENST00000621154 1765 ntBASIC24.8■■□□□ 1.56
RB1P06400 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RB1P06400 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RB1P06400 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
RB1P06400 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
RB1P06400 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RB1P06400 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
RB1P06400 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.79■■□□□ 1.56
RB1P06400 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.79■■□□□ 1.56
RB1P06400 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RB1P06400 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RB1P06400 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.79■■□□□ 1.56
RB1P06400 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.78■■□□□ 1.56
RB1P06400 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.78■■□□□ 1.56
RB1P06400 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RB1P06400 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.77■■□□□ 1.56
RB1P06400 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.77■■□□□ 1.56
RB1P06400 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.77■■□□□ 1.56
RB1P06400 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 AL138724.1-201ENST00000606771 1088 ntBASIC24.77■■□□□ 1.56
RB1P06400 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
RB1P06400 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.77■■□□□ 1.56
RB1P06400 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
RB1P06400 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.77■■□□□ 1.56
RB1P06400 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RB1P06400 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.76■■□□□ 1.55
RB1P06400 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.76■■□□□ 1.55
RB1P06400 AC027682.1-201ENST00000562846 899 ntBASIC24.76■■□□□ 1.55
RB1P06400 AC087623.3-201ENST00000607047 1098 ntBASIC24.76■■□□□ 1.55
RB1P06400 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
RB1P06400 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
RB1P06400 SERBP1P1-201ENST00000396021 1160 ntBASIC24.75■■□□□ 1.55
RB1P06400 AL162430.1-201ENST00000480705 870 ntBASIC24.75■■□□□ 1.55
RB1P06400 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.75■■□□□ 1.55
RB1P06400 AC011298.3-201ENST00000615796 283 ntBASIC24.75■■□□□ 1.55
RB1P06400 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RB1P06400 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RB1P06400 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.74■■□□□ 1.55
RB1P06400 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RB1P06400 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.74■■□□□ 1.55
RB1P06400 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.74■■□□□ 1.55
RB1P06400 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RB1P06400 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms