Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMPD2O60906 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.31■□□□□ 0.84
SMPD2O60906 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.31■□□□□ 0.84
SMPD2O60906 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.31■□□□□ 0.84
SMPD2O60906 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD2O60906 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD2O60906 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SMPD2O60906 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.31■□□□□ 0.84
SMPD2O60906 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD2O60906 AC022211.4-201ENST00000625094 2161 ntBASIC20.31■□□□□ 0.84
SMPD2O60906 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMPD2O60906 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.3■□□□□ 0.84
SMPD2O60906 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMPD2O60906 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMPD2O60906 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
SMPD2O60906 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.29■□□□□ 0.84
SMPD2O60906 AL136116.3-201ENST00000402907 1138 ntBASIC20.29■□□□□ 0.84
SMPD2O60906 AC131281.2-201ENST00000520478 145 ntBASIC20.29■□□□□ 0.84
SMPD2O60906 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.29■□□□□ 0.84
SMPD2O60906 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
SMPD2O60906 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMPD2O60906 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD2O60906 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD2O60906 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD2O60906 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD2O60906 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD2O60906 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.28■□□□□ 0.84
SMPD2O60906 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.28■□□□□ 0.84
SMPD2O60906 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMPD2O60906 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.28■□□□□ 0.84
SMPD2O60906 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SMPD2O60906 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.27■□□□□ 0.84
SMPD2O60906 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.27■□□□□ 0.84
SMPD2O60906 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.27■□□□□ 0.84
SMPD2O60906 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD2O60906 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD2O60906 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMPD2O60906 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD2O60906 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.27■□□□□ 0.84
SMPD2O60906 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD2O60906 AC010997.5-201ENST00000609182 354 ntBASIC20.27■□□□□ 0.84
SMPD2O60906 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.27■□□□□ 0.84
SMPD2O60906 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMPD2O60906 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD2O60906 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMPD2O60906 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD2O60906 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD2O60906 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.26■□□□□ 0.83
SMPD2O60906 MTDHP2-201ENST00000601468 714 ntBASIC20.26■□□□□ 0.83
SMPD2O60906 MIR6089-201ENST00000616698 64 ntBASIC20.26■□□□□ 0.83
SMPD2O60906 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SMPD2O60906 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD2O60906 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD2O60906 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMPD2O60906 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.26■□□□□ 0.83
SMPD2O60906 AC142381.3-201ENST00000568208 1670 ntBASIC20.26■□□□□ 0.83
SMPD2O60906 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD2O60906 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD2O60906 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.25■□□□□ 0.83
SMPD2O60906 MIR4281-201ENST00000580852 62 ntBASIC20.25■□□□□ 0.83
SMPD2O60906 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD2O60906 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.25■□□□□ 0.83
SMPD2O60906 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMPD2O60906 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD2O60906 AL356740.2-201ENST00000601559 647 ntBASIC20.24■□□□□ 0.83
SMPD2O60906 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD2O60906 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD2O60906 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMPD2O60906 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD2O60906 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SMPD2O60906 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.23■□□□□ 0.83
SMPD2O60906 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.23■□□□□ 0.83
SMPD2O60906 AC011551.1-201ENST00000614101 683 ntBASIC20.23■□□□□ 0.83
SMPD2O60906 MIR6724-1-201ENST00000616420 92 ntBASIC20.23■□□□□ 0.83
SMPD2O60906 MIR6724-2-201ENST00000616483 92 ntBASIC20.23■□□□□ 0.83
SMPD2O60906 MIR6724-4-201ENST00000617390 92 ntBASIC20.23■□□□□ 0.83
SMPD2O60906 MIR6724-3-201ENST00000622482 92 ntBASIC20.23■□□□□ 0.83
SMPD2O60906 AL117332.1-201ENST00000622628 974 ntBASIC20.23■□□□□ 0.83
SMPD2O60906 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD2O60906 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD2O60906 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMPD2O60906 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMPD2O60906 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.22■□□□□ 0.83
SMPD2O60906 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMPD2O60906 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms