Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.65■■□□□ 1.7
TRIM49BA6NDI0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.65■■□□□ 1.7
TRIM49BA6NDI0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
TRIM49BA6NDI0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM49BA6NDI0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM49BA6NDI0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TRIM49BA6NDI0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
TRIM49BA6NDI0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM49BA6NDI0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM49BA6NDI0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.64■■□□□ 1.7
TRIM49BA6NDI0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.64■■□□□ 1.7
TRIM49BA6NDI0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM49BA6NDI0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM49BA6NDI0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM49BA6NDI0 ABHD17AP5-201ENST00000580133 923 ntBASIC25.63■■□□□ 1.69
TRIM49BA6NDI0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM49BA6NDI0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM49BA6NDI0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.62■■□□□ 1.69
TRIM49BA6NDI0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.61■■□□□ 1.69
TRIM49BA6NDI0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 LONRF2P2-201ENST00000439212 571 ntBASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 AC090877.2-201ENST00000558441 1738 ntBASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM49BA6NDI0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
TRIM49BA6NDI0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 DUX4L18-201ENST00000553347 1267 ntBASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 NTF6A-201ENST00000591175 560 ntBASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM49BA6NDI0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
TRIM49BA6NDI0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.58■■□□□ 1.68
TRIM49BA6NDI0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
TRIM49BA6NDI0 AL592295.1-201ENST00000400984 884 ntBASIC25.57■■□□□ 1.68
TRIM49BA6NDI0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.57■■□□□ 1.68
TRIM49BA6NDI0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.57■■□□□ 1.68
TRIM49BA6NDI0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM49BA6NDI0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM49BA6NDI0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TRIM49BA6NDI0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
TRIM49BA6NDI0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.53■■□□□ 1.68
TRIM49BA6NDI0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM49BA6NDI0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM49BA6NDI0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
TRIM49BA6NDI0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM49BA6NDI0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
TRIM49BA6NDI0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms