Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRDV1A0A1B0GX56 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRDV1A0A1B0GX56 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRDV1A0A1B0GX56 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRDV1A0A1B0GX56 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRDV1A0A1B0GX56 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRDV1A0A1B0GX56 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRDV1A0A1B0GX56 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRDV1A0A1B0GX56 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRDV1A0A1B0GX56 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRDV1A0A1B0GX56 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRDV1A0A1B0GX56 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.4■□□□□ 0.86
TRDV1A0A1B0GX56 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRDV1A0A1B0GX56 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRDV1A0A1B0GX56 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TRDV1A0A1B0GX56 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRDV1A0A1B0GX56 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
TRDV1A0A1B0GX56 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TRDV1A0A1B0GX56 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRDV1A0A1B0GX56 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRDV1A0A1B0GX56 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRDV1A0A1B0GX56 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.38■□□□□ 0.85
TRDV1A0A1B0GX56 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.38■□□□□ 0.85
TRDV1A0A1B0GX56 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRDV1A0A1B0GX56 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 ANOS2P-203ENST00000472227 1816 ntBASIC20.37■□□□□ 0.85
TRDV1A0A1B0GX56 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRDV1A0A1B0GX56 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRDV1A0A1B0GX56 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.35■□□□□ 0.85
TRDV1A0A1B0GX56 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.35■□□□□ 0.85
TRDV1A0A1B0GX56 DUSP8P3-201ENST00000399571 1760 ntBASIC20.35■□□□□ 0.85
TRDV1A0A1B0GX56 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRDV1A0A1B0GX56 LINC00526-201ENST00000581067 1875 ntBASIC20.35■□□□□ 0.85
TRDV1A0A1B0GX56 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms