Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
TRAV9-2A0A087WT02 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 AP003733.4-201ENST00000623785 1697 ntBASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 AC126177.7-201ENST00000547904 679 ntBASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 AC148477.6-201ENST00000623746 465 ntBASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-2A0A087WT02 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-2A0A087WT02 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 AC233723.2-201ENST00000623798 2106 ntBASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV9-2A0A087WT02 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV9-2A0A087WT02 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 AC142472.1-201ENST00000612013 1741 ntBASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 AC141586.4-201ENST00000624558 1573 ntBASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-2A0A087WT02 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV9-2A0A087WT02 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV9-2A0A087WT02 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TRAV9-2A0A087WT02 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-2A0A087WT02 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-2A0A087WT02 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRAV9-2A0A087WT02 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-2A0A087WT02 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRAV9-2A0A087WT02 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-2A0A087WT02 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.33
TRAV9-2A0A087WT02 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-2A0A087WT02 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-2A0A087WT02 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-2A0A087WT02 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV9-2A0A087WT02 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV9-2A0A087WT02 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV9-2A0A087WT02 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-2A0A087WT02 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-2A0A087WT02 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRAV9-2A0A087WT02 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-2A0A087WT02 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-2A0A087WT02 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV9-2A0A087WT02 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms