Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 CICP4-201ENST00000447359 2812 ntBASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 FO538757.1-201ENST00000623083 1397 ntBASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 AL137784.3-201ENST00000623858 2288 ntBASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HLA-DRB4X5D2U9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC136604.1-201ENST00000418535 575 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AL080243.2-201ENST00000418783 582 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC107890.1-201ENST00000422478 521 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 METTL21AP1-201ENST00000438852 635 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC069120.2-201ENST00000524091 540 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 HNRNPUP1-201ENST00000554987 333 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC140878.1-201ENST00000565277 250 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 MIR4313-201ENST00000580760 101 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC006538.3-201ENST00000612495 578 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 MIR6069-201ENST00000620069 79 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC093028.1-201ENST00000622998 982 ntBASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HLA-DRB4X5D2U9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms