Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC025271.4-201ENST00000621477 1726 ntBASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 PCDHA12-202ENST00000613593 2588 ntBASIC17.32■□□□□ 0.36
PTCH2Q9Y6C5 ME2P1-201ENST00000426028 1970 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AC092171.3-201ENST00000610122 2651 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 PUDPP3-201ENST00000445368 636 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AC073150.1-201ENST00000450406 1084 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AC090857.1-201ENST00000527400 390 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AL160314.3-201ENST00000556041 767 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 MIR4754-201ENST00000582477 89 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 MIR6842-201ENST00000612539 65 ntBASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCH2Q9Y6C5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 TBC1D3J-201ENST00000620719 1426 ntBASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 AC141586.1-203ENST00000567242 366 ntBASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 AC005324.6-201ENST00000587972 613 ntBASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 AL162426.1-201ENST00000624141 743 ntBASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCH2Q9Y6C5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AL158070.2-201ENST00000623713 1621 ntBASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms