Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC2Q9Y5Z7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC084364.1-201ENST00000551967 1556 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 KRT8P29-201ENST00000420409 1371 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC021723.1-201ENST00000486306 515 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 SAMD11P1-201ENST00000571429 661 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 SPCS2P2-201ENST00000603270 608 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AL645939.5-201ENST00000606834 243 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 AC128714.1-201ENST00000637035 887 ntBASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC2Q9Y5Z7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 MAGEA5-201ENST00000446757 942 ntBASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 FTLP10-202ENST00000505798 471 ntBASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AC134698.3-201ENST00000523880 214 ntBASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 U62317.3-201ENST00000608319 855 ntBASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AL023803.2-201ENST00000620080 638 ntBASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AC022748.3-201ENST00000621828 275 ntBASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.04■□□□□ 0.16
HCFC2Q9Y5Z7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms