Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AC254562.1-201ENST00000417586 456 ntBASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 CNN2P11-201ENST00000429351 262 ntBASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 PHKG1P2-201ENST00000457537 863 ntBASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 BANF1P1-201ENST00000553684 263 ntBASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AC134684.3-201ENST00000641758 218 ntBASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 EEF1DP4-201ENST00000446006 880 ntBASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 AL596442.2-201ENST00000610240 980 ntBASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RHBDD3Q9Y3P4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms