Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 AL353779.1-201ENST00000434793 351 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 HMGN1P19-201ENST00000436976 333 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 AC002472.2-201ENST00000442739 958 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 FAM86LP-201ENST00000478302 853 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 PPT1-215ENST00000641471 2368 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 CLK3P2-201ENST00000427566 1453 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 C18orf15-201ENST00000623680 2534 ntBASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HDGFL3Q9Y3E1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 KRT8P44-201ENST00000441609 1350 ntBASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TERF1P3-201ENST00000505638 1227 ntBASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AC104596.2-201ENST00000512793 793 ntBASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AC093726.1-201ENST00000608064 963 ntBASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDGFL3Q9Y3E1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms