Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC092850.2-201ENST00000623821 2697 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FNDC3AQ9Y2H6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 AZGP1P1-201ENST00000411909 902 ntBASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 ELK1P1-201ENST00000485699 580 ntBASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SDHAP3-202ENST00000515467 728 ntBASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CTBP2P3-201ENST00000585629 1255 ntBASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 AL109936.8-201ENST00000641772 604 ntBASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FNDC3AQ9Y2H6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 SPDYE17-201ENST00000412399 783 ntBASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 TMEM14DP-201ENST00000422205 345 ntBASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 AC123567.1-201ENST00000548294 1261 ntBASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 AC011477.6-201ENST00000604980 1927 ntBASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FNDC3AQ9Y2H6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FNDC3AQ9Y2H6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FNDC3AQ9Y2H6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.93■□□□□ 0.14
FNDC3AQ9Y2H6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FNDC3AQ9Y2H6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FNDC3AQ9Y2H6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms