Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 AC006058.4-201ENST00000624016 1670 ntBASIC19.49■□□□□ 0.71
SCN11AQ9UI33 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN11AQ9UI33 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.48■□□□□ 0.71
SCN11AQ9UI33 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PCDHA1-201ENST00000378133 2726 ntBASIC19.48■□□□□ 0.71
SCN11AQ9UI33 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN11AQ9UI33 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 AC005740.2-201ENST00000511085 419 ntBASIC19.47■□□□□ 0.71
SCN11AQ9UI33 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 LILRP1-201ENST00000444199 1370 ntBASIC19.47■□□□□ 0.71
SCN11AQ9UI33 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 DOC2GP-204ENST00000639052 2548 ntBASIC19.47■□□□□ 0.71
SCN11AQ9UI33 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN11AQ9UI33 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 LTB4R2-202ENST00000528054 3092 ntBASIC19.46■□□□□ 0.71
SCN11AQ9UI33 MROH4P-201ENST00000431302 1578 ntBASIC19.46■□□□□ 0.71
SCN11AQ9UI33 AC023024.2-201ENST00000623561 1993 ntBASIC19.46■□□□□ 0.71
SCN11AQ9UI33 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms