Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AC142381.1-201ENST00000426099 345 ntBASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 FAM58DP-201ENST00000428076 619 ntBASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 RN7SL589P-201ENST00000481268 310 ntBASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 PRYP6-201ENST00000514804 343 ntBASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AC073389.1-201ENST00000595595 795 ntBASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AL390755.1-201ENST00000623716 2027 ntBASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CALCOCO1Q9P1Z2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 ST20-AS1-201ENST00000560255 4223 ntBASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 MIR346-201ENST00000362234 95 ntBASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AC008267.7-201ENST00000624570 1194 ntBASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 Z92544.3-201ENST00000624747 417 ntBASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CALCOCO1Q9P1Z2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CALCOCO1Q9P1Z2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CALCOCO1Q9P1Z2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CALCOCO1Q9P1Z2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.09■□□□□ 0.33
CALCOCO1Q9P1Z2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms