Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AP001063.1-201ENST00000568332 529 ntBASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AC017083.2-201ENST00000608069 979 ntBASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AC084364.1-201ENST00000551967 1556 ntBASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 ANKRD19P-201ENST00000338192 862 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 BCRP2-202ENST00000447763 634 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 BCRP6-201ENST00000510112 632 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 BCRP7-201ENST00000511549 544 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 PTP4A1P2-201ENST00000546033 454 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 MIR4259-201ENST00000584466 101 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 AL138799.1-201ENST00000448213 1675 ntBASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMG20BQ9P0W2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.83■□□□□ 0.61
HMG20BQ9P0W2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 BAATP1-201ENST00000412284 1225 ntBASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AP001582.1-201ENST00000525856 295 ntBASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AC009486.1-201ENST00000569860 813 ntBASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms