Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 TPM3P8-201ENST00000330554 643 ntBASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 SAMD11P1-201ENST00000571429 661 ntBASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 AP005117.1-202ENST00000581724 1908 ntBASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 AL354989.2-201ENST00000435838 1540 ntBASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 KRT8P14-201ENST00000414254 1442 ntBASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FBXO28Q9NVF7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 CD8B2-202ENST00000417670 633 ntBASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 GPAA1P2-201ENST00000417923 928 ntBASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 HOMER2P2-201ENST00000451621 847 ntBASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 AP006547.1-201ENST00000563435 692 ntBASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FBXO28Q9NVF7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
FBXO28Q9NVF7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
FBXO28Q9NVF7 AC026691.1-201ENST00000602502 2017 ntBASIC17.71■□□□□ 0.42
FBXO28Q9NVF7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
FBXO28Q9NVF7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.71■□□□□ 0.42
FBXO28Q9NVF7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 AC105250.1-201ENST00000509378 2057 ntBASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 AC104306.2-201ENST00000451877 341 ntBASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 RPSAP36-202ENST00000494591 1261 ntBASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 AC005695.3-201ENST00000614522 232 ntBASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 ENPP7P14-201ENST00000621765 1040 ntBASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.7■□□□□ 0.42
FBXO28Q9NVF7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms