Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL023775.1-201ENST00000454907 1746 ntBASIC16.39■□□□□ 0.21
TLR9Q9NR96 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
TLR9Q9NR96 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR9Q9NR96 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TLR9Q9NR96 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR9Q9NR96 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AC105129.2-201ENST00000559536 390 ntBASIC16.38■□□□□ 0.21
TLR9Q9NR96 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 NDUFV2P1-201ENST00000596415 907 ntBASIC16.38■□□□□ 0.21
TLR9Q9NR96 AL451050.2-201ENST00000606967 682 ntBASIC16.38■□□□□ 0.21
TLR9Q9NR96 AC025181.2-201ENST00000606994 802 ntBASIC16.38■□□□□ 0.21
TLR9Q9NR96 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AL596257.1-201ENST00000641463 2694 ntBASIC16.38■□□□□ 0.21
TLR9Q9NR96 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.38■□□□□ 0.21
TLR9Q9NR96 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR9Q9NR96 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 CROCCP1-201ENST00000426910 5675 ntBASIC16.37■□□□□ 0.21
TLR9Q9NR96 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 HINT2P1-201ENST00000419438 481 ntBASIC16.37■□□□□ 0.21
TLR9Q9NR96 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 LDHBP1-201ENST00000455730 1119 ntBASIC16.37■□□□□ 0.21
TLR9Q9NR96 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 ENPP7P14-201ENST00000621765 1040 ntBASIC16.37■□□□□ 0.21
TLR9Q9NR96 PRSS30P-206ENST00000641773 873 ntBASIC16.37■□□□□ 0.21
TLR9Q9NR96 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.37■□□□□ 0.21
TLR9Q9NR96 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TLR9Q9NR96 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms