Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AC092933.1-201ENST00000393644 945 ntBASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 BAATP1-201ENST00000412284 1225 ntBASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 FAM21FP-201ENST00000426241 1131 ntBASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AL355994.2-201ENST00000447882 704 ntBASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 RNA5SP412-201ENST00000516234 123 ntBASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AP000812.2-201ENST00000538934 718 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AP001063.1-201ENST00000568332 529 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AC097359.3-201ENST00000603982 1210 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AC005252.2-201ENST00000624630 1141 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 TUBB1P2-201ENST00000422712 1306 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 TUBB1P1-201ENST00000503144 1300 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AC134312.5-201ENST00000568031 1313 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AL607033.1-201ENST00000623900 1599 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 AC010491.1-201ENST00000563101 2797 ntBASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF3Q9HD45 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 MSTO2P-201ENST00000314835 1709 ntBASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF3Q9HD45 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms