Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 AP000845.1-201ENST00000581677 2131 ntBASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PHACTR1Q9C0D0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 UXT-AS1-201ENST00000590504 1525 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AC012508.2-201ENST00000567613 1472 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AL133267.1-201ENST00000398220 340 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 MIR940-201ENST00000401276 94 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 TARDBPP1-201ENST00000442013 1203 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 SLED1-202ENST00000512051 380 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 KRT18P58-201ENST00000527480 1120 ntBASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHACTR1Q9C0D0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 KRT8P12-202ENST00000472924 1397 ntBASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 AL592309.1-201ENST00000443127 649 ntBASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 TIMM8BP1-201ENST00000452384 211 ntBASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 AC040169.1-201ENST00000565382 521 ntBASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 C20orf181-201ENST00000623918 480 ntBASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHACTR1Q9C0D0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms