Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DUX4L26-201ENST00000489078 1255 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 AC109635.5-201ENST00000533593 962 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 SART3-203ENST00000546611 1184 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 FICD-205ENST00000552758 603 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 HNRNPUP1-201ENST00000554987 333 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 AC008667.4-201ENST00000607370 168 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 SBF1P1-201ENST00000444527 5631 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LITAFQ99732 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LITAFQ99732 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.34□□□□□ -0.75
LITAFQ99732 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 AL031432.2-201ENST00000566714 459 ntBASIC10.34□□□□□ -0.75
LITAFQ99732 AL928711.1-201ENST00000570165 459 ntBASIC10.34□□□□□ -0.75
LITAFQ99732 OR7E47P-204ENST00000575924 449 ntBASIC10.34□□□□□ -0.75
LITAFQ99732 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 RBM42-202ENST00000586618 771 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 IL11-204ENST00000590625 1028 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 AC006557.2-201ENST00000592985 1240 ntBASIC10.34□□□□□ -0.75
LITAFQ99732 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.34□□□□□ -0.75
LITAFQ99732 AC012306.2-201ENST00000609350 630 ntBASIC10.34□□□□□ -0.75
LITAFQ99732 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 AL645728.2-201ENST00000641974 660 ntBASIC10.34□□□□□ -0.75
LITAFQ99732 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.34□□□□□ -0.75
LITAFQ99732 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.34□□□□□ -0.75
LITAFQ99732 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.34□□□□□ -0.75
LITAFQ99732 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LITAFQ99732 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LITAFQ99732 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms