Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 UROS-201ENST00000368774 744 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AC004522.1-201ENST00000419978 654 ntBASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 RN7SL396P-201ENST00000471086 295 ntBASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AL031713.1-201ENST00000564813 661 ntBASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 ENPP7P14-201ENST00000621765 1040 ntBASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 MIR4783-201ENST00000580343 82 ntBASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AC002472.4-201ENST00000641915 272 ntBASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSMD1Q96PZ7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TUBB8P8-201ENST00000458717 1058 ntBASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 AP001002.3-201ENST00000623482 206 ntBASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 AC233280.19-201ENST00000633223 136 ntBASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 IL9RP3-201ENST00000442856 1674 ntBASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.96□□□□□ -0.33
CSMD1Q96PZ7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms