Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AP001258.2-201ENST00000529891 490 ntBASIC18.18■□□□□ 0.5
TRIM47Q96LD4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AL022328.3-201ENST00000607943 679 ntBASIC18.18■□□□□ 0.5
TRIM47Q96LD4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AC105917.1-201ENST00000506637 2539 ntBASIC18.18■□□□□ 0.5
TRIM47Q96LD4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM47Q96LD4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 KRT18P64-201ENST00000434946 1219 ntBASIC18.17■□□□□ 0.5
TRIM47Q96LD4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 VDAC1P7-201ENST00000462417 847 ntBASIC18.17■□□□□ 0.5
TRIM47Q96LD4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 AP001063.1-201ENST00000568332 529 ntBASIC18.17■□□□□ 0.5
TRIM47Q96LD4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 GNRHR2-203ENST00000581100 1187 ntBASIC18.17■□□□□ 0.5
TRIM47Q96LD4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM47Q96LD4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 TOMM22P5-201ENST00000416399 439 ntBASIC18.16■□□□□ 0.5
TRIM47Q96LD4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.16■□□□□ 0.5
TRIM47Q96LD4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM47Q96LD4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms