Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.46■□□□□ 0.23
ALPK3Q96L96 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.46■□□□□ 0.23
ALPK3Q96L96 AC138696.2-201ENST00000607376 223 ntBASIC16.46■□□□□ 0.23
ALPK3Q96L96 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.46■□□□□ 0.23
ALPK3Q96L96 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ALPK3Q96L96 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.46■□□□□ 0.23
ALPK3Q96L96 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ALPK3Q96L96 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.46■□□□□ 0.22
ALPK3Q96L96 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.46■□□□□ 0.22
ALPK3Q96L96 CYP4F23P-201ENST00000593402 1579 ntBASIC16.46■□□□□ 0.22
ALPK3Q96L96 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 AL807761.2-201ENST00000422849 729 ntBASIC16.45■□□□□ 0.22
ALPK3Q96L96 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 MIR4472-1-201ENST00000584349 80 ntBASIC16.45■□□□□ 0.22
ALPK3Q96L96 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 AC087392.5-201ENST00000612517 489 ntBASIC16.45■□□□□ 0.22
ALPK3Q96L96 MME-218ENST00000625667 363 ntTSL 5 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 AC006058.4-201ENST00000624016 1670 ntBASIC16.45■□□□□ 0.22
ALPK3Q96L96 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 AC018629.1-201ENST00000623381 1736 ntBASIC16.45■□□□□ 0.22
ALPK3Q96L96 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ALPK3Q96L96 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.45■□□□□ 0.22
ALPK3Q96L96 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 AC011676.5-201ENST00000624864 2660 ntBASIC16.44■□□□□ 0.22
ALPK3Q96L96 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 AC092299.1-201ENST00000632679 757 ntBASIC16.44■□□□□ 0.22
ALPK3Q96L96 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
ALPK3Q96L96 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ALPK3Q96L96 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ALPK3Q96L96 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ALPK3Q96L96 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ALPK3Q96L96 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ALPK3Q96L96 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ALPK3Q96L96 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ALPK3Q96L96 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 AC024293.1-201ENST00000467930 498 ntBASIC16.43■□□□□ 0.22
ALPK3Q96L96 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ALPK3Q96L96 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms