Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 SPDYE17-201ENST00000412399 783 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 RPL37AP1-201ENST00000412502 279 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 AL080243.2-201ENST00000418783 582 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 BCRP1-201ENST00000444246 691 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 SERBP1P3-201ENST00000459980 809 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 AC243562.2-201ENST00000561247 970 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 AC106881.1-201ENST00000605849 3329 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 AL109954.1-202ENST00000564051 2148 ntBASIC14.98□□□□□ -0.01
VMP1Q96GC9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VMP1Q96GC9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VMP1Q96GC9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 CDC14C-201ENST00000428251 1719 ntBASIC14.97□□□□□ -0.01
VMP1Q96GC9 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 HAUS4P1-201ENST00000406739 1145 ntBASIC14.97□□□□□ -0.01
VMP1Q96GC9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 CYP4F24P-201ENST00000586049 1580 ntBASIC14.97□□□□□ -0.01
VMP1Q96GC9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 KRT8P12-202ENST00000472924 1397 ntBASIC14.97□□□□□ -0.01
VMP1Q96GC9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.97□□□□□ -0.01
VMP1Q96GC9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VMP1Q96GC9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.96□□□□□ -0.01
VMP1Q96GC9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VMP1Q96GC9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.96□□□□□ -0.01
VMP1Q96GC9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.96□□□□□ -0.01
VMP1Q96GC9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.96□□□□□ -0.01
VMP1Q96GC9 AC007191.1-201ENST00000623179 2995 ntBASIC14.96□□□□□ -0.01
VMP1Q96GC9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VMP1Q96GC9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms