Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 MROH4P-201ENST00000431302 1578 ntBASIC15.01□□□□□ -0.01
VPS33AQ96AX1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AL607033.1-201ENST00000623900 1599 ntBASIC15.01□□□□□ -0.01
VPS33AQ96AX1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 CICP11-201ENST00000434745 2827 ntBASIC15.01□□□□□ -0.01
VPS33AQ96AX1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 MIR346-201ENST00000362234 95 ntBASIC15□□□□□ -0.01
VPS33AQ96AX1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15□□□□□ -0.01
VPS33AQ96AX1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 HLA-H-201ENST00000383620 1096 ntBASIC15□□□□□ -0.01
VPS33AQ96AX1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 HNRNPA1P28-201ENST00000424481 961 ntBASIC15□□□□□ -0.01
VPS33AQ96AX1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 RNA5SP416-201ENST00000516838 111 ntBASIC15□□□□□ -0.01
VPS33AQ96AX1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15□□□□□ -0.01
VPS33AQ96AX1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VPS33AQ96AX1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15□□□□□ -0.01
VPS33AQ96AX1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15□□□□□ -0.01
VPS33AQ96AX1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15□□□□□ -0.01
VPS33AQ96AX1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VPS33AQ96AX1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS33AQ96AX1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VPS33AQ96AX1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS33AQ96AX1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 AC117489.1-201ENST00000625169 3217 ntBASIC14.99□□□□□ -0.01
VPS33AQ96AX1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 SPCS2P4-201ENST00000436160 681 ntBASIC14.99□□□□□ -0.01
VPS33AQ96AX1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 AC092902.6-201ENST00000641783 218 ntBASIC14.99□□□□□ -0.01
VPS33AQ96AX1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms