Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 NKAIN1P1-201ENST00000435754 582 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 UPF3AP2-201ENST00000457924 1132 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 SERPINA13P-202ENST00000478994 924 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC044849.1-201ENST00000519737 1188 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AP003171.2-201ENST00000528208 925 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC105129.2-201ENST00000559536 390 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC079328.1-201ENST00000560358 952 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC138649.2-201ENST00000615886 705 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AC138627.1-207ENST00000641560 1006 ntBASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAPGEF4Q8WZA2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.14■□□□□ 0.82
RAPGEF4Q8WZA2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAPGEF4Q8WZA2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAPGEF4Q8WZA2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAPGEF4Q8WZA2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AC016700.1-201ENST00000429424 312 ntBASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 HIST2H2BB-201ENST00000449108 381 ntBASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AC106820.3-201ENST00000561653 397 ntBASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 MIR3619-201ENST00000579667 83 ntBASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AP001002.3-201ENST00000623482 206 ntBASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.14■□□□□ 0.81
RAPGEF4Q8WZA2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AC015967.2-201ENST00000624092 234 ntBASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AC006435.4-201ENST00000625037 234 ntBASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 AL356737.1-201ENST00000634391 234 ntBASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAPGEF4Q8WZA2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms