Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
STAG1Q8WVM7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 AC073347.1-201ENST00000421633 2643 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 TMEM14DP-201ENST00000422205 345 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ATP5G2P4-201ENST00000442175 420 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 AC004066.1-201ENST00000502488 802 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 HILS1-202ENST00000545329 423 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 AC010319.3-201ENST00000597028 470 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 AC148477.4-201ENST00000613430 1793 ntBASIC18.22■□□□□ 0.51
STAG1Q8WVM7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
STAG1Q8WVM7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 AC068418.2-201ENST00000577309 3703 ntBASIC18.21■□□□□ 0.51
STAG1Q8WVM7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 AC112492.5-201ENST00000421897 457 ntBASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ACTG1P3-201ENST00000431775 1114 ntBASIC18.21■□□□□ 0.51
STAG1Q8WVM7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 KRT17P8-201ENST00000540749 863 ntBASIC18.21■□□□□ 0.51
STAG1Q8WVM7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 AP001063.1-201ENST00000568332 529 ntBASIC18.21■□□□□ 0.51
STAG1Q8WVM7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 MIR5189-201ENST00000577370 114 ntBASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
STAG1Q8WVM7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.21■□□□□ 0.5
STAG1Q8WVM7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.21■□□□□ 0.5
STAG1Q8WVM7 AC023024.2-201ENST00000623561 1993 ntBASIC18.21■□□□□ 0.5
STAG1Q8WVM7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 AL109954.1-202ENST00000564051 2148 ntBASIC18.2■□□□□ 0.5
STAG1Q8WVM7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms